Protein–RNA interactions for Protein: Q5I0G3

MDH1B, Putative malate dehydrogenase 1B, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1BQ5I0G3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MDH1BQ5I0G3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MDH1BQ5I0G3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MDH1BQ5I0G3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
MDH1BQ5I0G3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.39■■□□□ 1.18
MDH1BQ5I0G3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
MDH1BQ5I0G3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
MDH1BQ5I0G3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.39■■□□□ 1.18
MDH1BQ5I0G3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
MDH1BQ5I0G3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
MDH1BQ5I0G3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
MDH1BQ5I0G3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.39■■□□□ 1.17
MDH1BQ5I0G3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.39■■□□□ 1.17
MDH1BQ5I0G3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.39■■□□□ 1.17
MDH1BQ5I0G3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
MDH1BQ5I0G3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.39■■□□□ 1.17
MDH1BQ5I0G3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
MDH1BQ5I0G3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
MDH1BQ5I0G3 AC061975.6-201ENST00000579045 1553 ntBASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 CDCA4P2-201ENST00000441182 718 ntBASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MDH1BQ5I0G3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.37■■□□□ 1.17
MDH1BQ5I0G3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.37■■□□□ 1.17
MDH1BQ5I0G3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
MDH1BQ5I0G3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
MDH1BQ5I0G3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MDH1BQ5I0G3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MDH1BQ5I0G3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MDH1BQ5I0G3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
MDH1BQ5I0G3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MDH1BQ5I0G3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MDH1BQ5I0G3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MDH1BQ5I0G3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
MDH1BQ5I0G3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MDH1BQ5I0G3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 POU5F1P4-201ENST00000413175 1085 ntBASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.36■■□□□ 1.17
MDH1BQ5I0G3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 RAP2CP1-201ENST00000605103 478 ntBASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 AC120498.10-201ENST00000621827 505 ntBASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.35■■□□□ 1.17
MDH1BQ5I0G3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
MDH1BQ5I0G3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
MDH1BQ5I0G3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
MDH1BQ5I0G3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MDH1BQ5I0G3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MDH1BQ5I0G3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MDH1BQ5I0G3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MDH1BQ5I0G3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.34■■□□□ 1.17
MDH1BQ5I0G3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.34■■□□□ 1.17
MDH1BQ5I0G3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.34■■□□□ 1.17
MDH1BQ5I0G3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
MDH1BQ5I0G3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
MDH1BQ5I0G3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms