Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 AC006128.1-201ENST00000624704 1661 ntBASIC20.16■□□□□ 0.82
PDCD4Q53EL6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.16■□□□□ 0.82
PDCD4Q53EL6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
PDCD4Q53EL6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDCD4Q53EL6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.15■□□□□ 0.82
PDCD4Q53EL6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.15■□□□□ 0.82
PDCD4Q53EL6 MIR4466-201ENST00000606121 54 ntBASIC20.15■□□□□ 0.82
PDCD4Q53EL6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.15■□□□□ 0.82
PDCD4Q53EL6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDCD4Q53EL6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PDCD4Q53EL6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.15■□□□□ 0.82
PDCD4Q53EL6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDCD4Q53EL6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
PDCD4Q53EL6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PDCD4Q53EL6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDCD4Q53EL6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 SMUG1P1-201ENST00000590640 811 ntBASIC20.13■□□□□ 0.81
PDCD4Q53EL6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.13■□□□□ 0.81
PDCD4Q53EL6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 GABARAPL3-202ENST00000624044 1851 ntBASIC20.12■□□□□ 0.81
PDCD4Q53EL6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDCD4Q53EL6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDCD4Q53EL6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDCD4Q53EL6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDCD4Q53EL6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.11■□□□□ 0.81
PDCD4Q53EL6 AL356441.2-201ENST00000443009 864 ntBASIC20.11■□□□□ 0.81
PDCD4Q53EL6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
PDCD4Q53EL6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.11■□□□□ 0.81
PDCD4Q53EL6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDCD4Q53EL6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDCD4Q53EL6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDCD4Q53EL6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDCD4Q53EL6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PDCD4Q53EL6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDCD4Q53EL6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms