Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.64■□□□□ 0.73
TUBA4AP68366 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA4AP68366 AC099791.2-201ENST00000605725 427 ntBASIC19.64■□□□□ 0.73
TUBA4AP68366 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA4AP68366 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA4AP68366 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA4AP68366 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.64■□□□□ 0.73
TUBA4AP68366 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA4AP68366 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TUBA4AP68366 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA4AP68366 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA4AP68366 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TUBA4AP68366 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TUBA4AP68366 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.63■□□□□ 0.73
TUBA4AP68366 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA4AP68366 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA4AP68366 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TUBA4AP68366 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA4AP68366 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA4AP68366 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA4AP68366 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA4AP68366 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA4AP68366 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.62■□□□□ 0.73
TUBA4AP68366 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.62■□□□□ 0.73
TUBA4AP68366 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA4AP68366 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA4AP68366 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TUBA4AP68366 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.62■□□□□ 0.73
TUBA4AP68366 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA4AP68366 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA4AP68366 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA4AP68366 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA4AP68366 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA4AP68366 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA4AP68366 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBA4AP68366 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TUBA4AP68366 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA4AP68366 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.61■□□□□ 0.73
TUBA4AP68366 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TUBA4AP68366 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA4AP68366 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA4AP68366 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.61■□□□□ 0.73
TUBA4AP68366 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA4AP68366 AC006455.2-201ENST00000429931 906 ntBASIC19.61■□□□□ 0.73
TUBA4AP68366 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA4AP68366 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA4AP68366 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA4AP68366 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBA4AP68366 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBA4AP68366 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TUBA4AP68366 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA4AP68366 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA4AP68366 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TUBA4AP68366 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA4AP68366 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBA4AP68366 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TUBA4AP68366 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA4AP68366 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TUBA4AP68366 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA4AP68366 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA4AP68366 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA4AP68366 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TUBA4AP68366 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TUBA4AP68366 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA4AP68366 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
TUBA4AP68366 AC096631.2-201ENST00000436136 790 ntBASIC19.6■□□□□ 0.73
TUBA4AP68366 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.6■□□□□ 0.73
TUBA4AP68366 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.6■□□□□ 0.73
TUBA4AP68366 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA4AP68366 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA4AP68366 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.6■□□□□ 0.73
TUBA4AP68366 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA4AP68366 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA4AP68366 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA4AP68366 BX323043.1-201ENST00000641006 1765 ntBASIC19.6■□□□□ 0.73
TUBA4AP68366 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA4AP68366 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.59■□□□□ 0.73
TUBA4AP68366 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.59■□□□□ 0.73
TUBA4AP68366 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TUBA4AP68366 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA4AP68366 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA4AP68366 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TUBA4AP68366 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA4AP68366 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.59■□□□□ 0.73
TUBA4AP68366 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA4AP68366 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.59■□□□□ 0.73
TUBA4AP68366 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA4AP68366 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA4AP68366 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.59■□□□□ 0.73
TUBA4AP68366 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.59■□□□□ 0.73
TUBA4AP68366 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TUBA4AP68366 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA4AP68366 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA4AP68366 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA4AP68366 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA4AP68366 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.59■□□□□ 0.73
TUBA4AP68366 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA4AP68366 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TUBA4AP68366 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TUBA4AP68366 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms