Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
SUPT4H1P63272 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUPT4H1P63272 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUPT4H1P63272 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SUPT4H1P63272 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.35■□□□□ 0.37
SUPT4H1P63272 AL034346.1-201ENST00000568244 1277 ntBASIC17.35■□□□□ 0.37
SUPT4H1P63272 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.35■□□□□ 0.37
SUPT4H1P63272 AC241377.3-202ENST00000626088 1088 ntBASIC17.35■□□□□ 0.37
SUPT4H1P63272 AC241585.3-202ENST00000628937 1088 ntBASIC17.35■□□□□ 0.37
SUPT4H1P63272 AC245100.8-202ENST00000629247 1058 ntBASIC17.35■□□□□ 0.37
SUPT4H1P63272 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUPT4H1P63272 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SUPT4H1P63272 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.35■□□□□ 0.37
SUPT4H1P63272 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.35■□□□□ 0.37
SUPT4H1P63272 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SUPT4H1P63272 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SUPT4H1P63272 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
SUPT4H1P63272 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUPT4H1P63272 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUPT4H1P63272 AC112907.3-201ENST00000577781 2400 ntBASIC17.35■□□□□ 0.37
SUPT4H1P63272 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT4H1P63272 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT4H1P63272 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT4H1P63272 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT4H1P63272 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT4H1P63272 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT4H1P63272 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.34■□□□□ 0.37
SUPT4H1P63272 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT4H1P63272 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.34■□□□□ 0.37
SUPT4H1P63272 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.34■□□□□ 0.37
SUPT4H1P63272 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT4H1P63272 AC012354.3-201ENST00000623734 483 ntBASIC17.34■□□□□ 0.37
SUPT4H1P63272 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.34■□□□□ 0.37
SUPT4H1P63272 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SUPT4H1P63272 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.33■□□□□ 0.37
SUPT4H1P63272 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
SUPT4H1P63272 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.33■□□□□ 0.37
SUPT4H1P63272 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SUPT4H1P63272 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SUPT4H1P63272 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SUPT4H1P63272 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.33■□□□□ 0.36
SUPT4H1P63272 AC006455.2-201ENST00000429931 906 ntBASIC17.33■□□□□ 0.36
SUPT4H1P63272 AC010141.3-201ENST00000456659 717 ntBASIC17.33■□□□□ 0.36
SUPT4H1P63272 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.33■□□□□ 0.36
SUPT4H1P63272 pRNA.6-201ENST00000610482 90 ntBASIC17.33■□□□□ 0.36
SUPT4H1P63272 pRNA.5-201ENST00000612139 90 ntBASIC17.33■□□□□ 0.36
SUPT4H1P63272 pRNA.11-201ENST00000618423 90 ntBASIC17.33■□□□□ 0.36
SUPT4H1P63272 pRNA.13-201ENST00000619112 90 ntBASIC17.33■□□□□ 0.36
SUPT4H1P63272 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT4H1P63272 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SUPT4H1P63272 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.33■□□□□ 0.36
SUPT4H1P63272 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.33■□□□□ 0.36
SUPT4H1P63272 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SUPT4H1P63272 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT4H1P63272 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT4H1P63272 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SUPT4H1P63272 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT4H1P63272 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT4H1P63272 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.32■□□□□ 0.36
SUPT4H1P63272 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT4H1P63272 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT4H1P63272 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SUPT4H1P63272 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.32■□□□□ 0.36
SUPT4H1P63272 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT4H1P63272 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT4H1P63272 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT4H1P63272 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT4H1P63272 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.32■□□□□ 0.36
SUPT4H1P63272 AC087239.1-201ENST00000622671 572 ntBASIC17.32■□□□□ 0.36
SUPT4H1P63272 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT4H1P63272 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT4H1P63272 AC007225.1-201ENST00000566331 1836 ntBASIC17.32■□□□□ 0.36
SUPT4H1P63272 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.32■□□□□ 0.36
SUPT4H1P63272 AL162377.1-201ENST00000618844 1793 ntBASIC17.32■□□□□ 0.36
SUPT4H1P63272 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.32■□□□□ 0.36
SUPT4H1P63272 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT4H1P63272 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT4H1P63272 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT4H1P63272 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT4H1P63272 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.31■□□□□ 0.36
SUPT4H1P63272 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.31■□□□□ 0.36
SUPT4H1P63272 AL117332.1-201ENST00000622628 974 ntBASIC17.31■□□□□ 0.36
SUPT4H1P63272 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.31■□□□□ 0.36
SUPT4H1P63272 AP004607.7-201ENST00000527152 1677 ntBASIC17.31■□□□□ 0.36
SUPT4H1P63272 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT4H1P63272 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SUPT4H1P63272 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.31■□□□□ 0.36
SUPT4H1P63272 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT4H1P63272 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT4H1P63272 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.31■□□□□ 0.36
SUPT4H1P63272 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUPT4H1P63272 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.3■□□□□ 0.36
SUPT4H1P63272 AC121338.2-201ENST00000622535 1744 ntBASIC17.3■□□□□ 0.36
SUPT4H1P63272 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.3■□□□□ 0.36
SUPT4H1P63272 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUPT4H1P63272 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SUPT4H1P63272 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SUPT4H1P63272 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SUPT4H1P63272 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.3■□□□□ 0.36
SUPT4H1P63272 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms