Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM6P62312 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LSM6P62312 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.46■□□□□ 0.55
LSM6P62312 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LSM6P62312 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.46■□□□□ 0.55
LSM6P62312 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM6P62312 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM6P62312 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LSM6P62312 AC079140.4-201ENST00000507448 529 ntBASIC18.46■□□□□ 0.55
LSM6P62312 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM6P62312 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LSM6P62312 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM6P62312 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
LSM6P62312 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.46■□□□□ 0.54
LSM6P62312 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
LSM6P62312 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
LSM6P62312 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM6P62312 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM6P62312 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM6P62312 LINC02228-203ENST00000641970 1355 ntBASIC18.45■□□□□ 0.54
LSM6P62312 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LSM6P62312 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM6P62312 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LSM6P62312 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM6P62312 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
LSM6P62312 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.45■□□□□ 0.54
LSM6P62312 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.45■□□□□ 0.54
LSM6P62312 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM6P62312 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM6P62312 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.45■□□□□ 0.54
LSM6P62312 KRT87P-202ENST00000534226 1464 ntBASIC18.45■□□□□ 0.54
LSM6P62312 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LSM6P62312 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.44■□□□□ 0.54
LSM6P62312 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LSM6P62312 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.44■□□□□ 0.54
LSM6P62312 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM6P62312 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LSM6P62312 AC123595.1-201ENST00000440769 1046 ntBASIC18.44■□□□□ 0.54
LSM6P62312 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.44■□□□□ 0.54
LSM6P62312 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM6P62312 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LSM6P62312 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM6P62312 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM6P62312 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM6P62312 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM6P62312 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.43■□□□□ 0.54
LSM6P62312 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.43■□□□□ 0.54
LSM6P62312 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM6P62312 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.43■□□□□ 0.54
LSM6P62312 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.43■□□□□ 0.54
LSM6P62312 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM6P62312 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM6P62312 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LSM6P62312 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.43■□□□□ 0.54
LSM6P62312 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LSM6P62312 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.42■□□□□ 0.54
LSM6P62312 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM6P62312 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
LSM6P62312 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LSM6P62312 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.42■□□□□ 0.54
LSM6P62312 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LSM6P62312 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM6P62312 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
LSM6P62312 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM6P62312 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM6P62312 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.42■□□□□ 0.54
LSM6P62312 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM6P62312 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM6P62312 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LSM6P62312 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM6P62312 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
LSM6P62312 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM6P62312 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.41■□□□□ 0.54
LSM6P62312 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM6P62312 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM6P62312 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LSM6P62312 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM6P62312 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM6P62312 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LSM6P62312 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.41■□□□□ 0.54
LSM6P62312 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LSM6P62312 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.41■□□□□ 0.54
LSM6P62312 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LSM6P62312 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.41■□□□□ 0.54
LSM6P62312 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.41■□□□□ 0.54
LSM6P62312 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LSM6P62312 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LSM6P62312 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LSM6P62312 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LSM6P62312 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM6P62312 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM6P62312 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM6P62312 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.4■□□□□ 0.54
LSM6P62312 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM6P62312 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LSM6P62312 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM6P62312 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.4■□□□□ 0.54
LSM6P62312 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM6P62312 POU5F1P4-201ENST00000413175 1085 ntBASIC18.4■□□□□ 0.54
LSM6P62312 YBX1P1-201ENST00000445822 960 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms