Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.15■□□□□ 0.66
CXCR4P61073 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCR4P61073 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.15■□□□□ 0.66
CXCR4P61073 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCR4P61073 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCR4P61073 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCR4P61073 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.15■□□□□ 0.66
CXCR4P61073 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCR4P61073 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CXCR4P61073 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CXCR4P61073 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
CXCR4P61073 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CXCR4P61073 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CXCR4P61073 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.14■□□□□ 0.65
CXCR4P61073 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCR4P61073 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CXCR4P61073 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCR4P61073 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCR4P61073 AL117332.1-201ENST00000622628 974 ntBASIC19.14■□□□□ 0.65
CXCR4P61073 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCR4P61073 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCR4P61073 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCR4P61073 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCR4P61073 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.14■□□□□ 0.65
CXCR4P61073 AL391422.3-201ENST00000603791 2761 ntBASIC19.14■□□□□ 0.65
CXCR4P61073 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CXCR4P61073 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CXCR4P61073 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CXCR4P61073 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CXCR4P61073 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR4P61073 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CXCR4P61073 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR4P61073 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.13■□□□□ 0.65
CXCR4P61073 RARRES2P1-201ENST00000474487 481 ntBASIC19.13■□□□□ 0.65
CXCR4P61073 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR4P61073 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CXCR4P61073 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CXCR4P61073 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR4P61073 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.13■□□□□ 0.65
CXCR4P61073 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR4P61073 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CXCR4P61073 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR4P61073 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR4P61073 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.13■□□□□ 0.65
CXCR4P61073 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR4P61073 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR4P61073 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR4P61073 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR4P61073 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCR4P61073 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR4P61073 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR4P61073 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CXCR4P61073 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.12■□□□□ 0.65
CXCR4P61073 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CXCR4P61073 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.12■□□□□ 0.65
CXCR4P61073 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CXCR4P61073 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR4P61073 AC027702.1-201ENST00000563810 1770 ntBASIC19.12■□□□□ 0.65
CXCR4P61073 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.12■□□□□ 0.65
CXCR4P61073 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR4P61073 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.12■□□□□ 0.65
CXCR4P61073 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR4P61073 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR4P61073 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR4P61073 AC009299.2-201ENST00000482477 511 ntBASIC19.12■□□□□ 0.65
CXCR4P61073 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR4P61073 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR4P61073 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR4P61073 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.12■□□□□ 0.65
CXCR4P61073 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR4P61073 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCR4P61073 AC020907.5-201ENST00000624372 1936 ntBASIC19.12■□□□□ 0.65
CXCR4P61073 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR4P61073 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR4P61073 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CXCR4P61073 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR4P61073 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR4P61073 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CXCR4P61073 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR4P61073 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.11■□□□□ 0.65
CXCR4P61073 MIR6724-1-201ENST00000616420 92 ntBASIC19.11■□□□□ 0.65
CXCR4P61073 MIR6724-2-201ENST00000616483 92 ntBASIC19.11■□□□□ 0.65
CXCR4P61073 MIR6724-4-201ENST00000617390 92 ntBASIC19.11■□□□□ 0.65
CXCR4P61073 MIR6724-3-201ENST00000622482 92 ntBASIC19.11■□□□□ 0.65
CXCR4P61073 AC241377.3-202ENST00000626088 1088 ntBASIC19.11■□□□□ 0.65
CXCR4P61073 AC241585.3-202ENST00000628937 1088 ntBASIC19.11■□□□□ 0.65
CXCR4P61073 AC245100.8-202ENST00000629247 1058 ntBASIC19.11■□□□□ 0.65
CXCR4P61073 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR4P61073 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.11■□□□□ 0.65
CXCR4P61073 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR4P61073 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CXCR4P61073 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR4P61073 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CXCR4P61073 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR4P61073 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.1■□□□□ 0.65
CXCR4P61073 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR4P61073 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CXCR4P61073 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CXCR4P61073 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCR4P61073 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms