Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPCS3P61009 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPCS3P61009 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.02■□□□□ 0.32
SPCS3P61009 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPCS3P61009 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SPCS3P61009 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPCS3P61009 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SPCS3P61009 SRD5A1P1-201ENST00000442297 786 ntBASIC17.02■□□□□ 0.32
SPCS3P61009 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.02■□□□□ 0.32
SPCS3P61009 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.02■□□□□ 0.32
SPCS3P61009 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPCS3P61009 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPCS3P61009 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPCS3P61009 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.02■□□□□ 0.31
SPCS3P61009 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.02■□□□□ 0.31
SPCS3P61009 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.01■□□□□ 0.31
SPCS3P61009 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SPCS3P61009 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SPCS3P61009 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.01■□□□□ 0.31
SPCS3P61009 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SPCS3P61009 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 AC026471.1-201ENST00000564629 3026 ntBASIC17.01■□□□□ 0.31
SPCS3P61009 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.01■□□□□ 0.31
SPCS3P61009 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPCS3P61009 AP004607.7-201ENST00000527152 1677 ntBASIC17.01■□□□□ 0.31
SPCS3P61009 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SPCS3P61009 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 AC003102.1-202ENST00000563394 1796 ntBASIC17■□□□□ 0.31
SPCS3P61009 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17■□□□□ 0.31
SPCS3P61009 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SPCS3P61009 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 AL157384.1-201ENST00000445995 2473 ntBASIC17■□□□□ 0.31
SPCS3P61009 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 OR2A1-AS1-204ENST00000470435 602 ntBASIC17■□□□□ 0.31
SPCS3P61009 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17■□□□□ 0.31
SPCS3P61009 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17■□□□□ 0.31
SPCS3P61009 MIR3621-201ENST00000580529 85 ntBASIC17■□□□□ 0.31
SPCS3P61009 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17■□□□□ 0.31
SPCS3P61009 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17■□□□□ 0.31
SPCS3P61009 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17■□□□□ 0.31
SPCS3P61009 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
SPCS3P61009 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
SPCS3P61009 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
SPCS3P61009 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPCS3P61009 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.99■□□□□ 0.31
SPCS3P61009 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.99■□□□□ 0.31
SPCS3P61009 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.99■□□□□ 0.31
SPCS3P61009 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.99■□□□□ 0.31
SPCS3P61009 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS3P61009 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS3P61009 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS3P61009 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS3P61009 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SPCS3P61009 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS3P61009 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS3P61009 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS3P61009 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.99■□□□□ 0.31
SPCS3P61009 AC010525.1-201ENST00000585559 441 ntBASIC16.99■□□□□ 0.31
SPCS3P61009 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS3P61009 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS3P61009 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS3P61009 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.99■□□□□ 0.31
SPCS3P61009 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPCS3P61009 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SPCS3P61009 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPCS3P61009 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.98■□□□□ 0.31
SPCS3P61009 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.98■□□□□ 0.31
SPCS3P61009 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms