Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AC005224.4-201ENST00000583262 1652 ntBASIC17.42■□□□□ 0.38
RIPPLY3P57055 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIPPLY3P57055 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.41■□□□□ 0.38
RIPPLY3P57055 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
RIPPLY3P57055 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RIPPLY3P57055 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.41■□□□□ 0.38
RIPPLY3P57055 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RIPPLY3P57055 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPPLY3P57055 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPPLY3P57055 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.41■□□□□ 0.38
RIPPLY3P57055 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RIPPLY3P57055 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.41■□□□□ 0.38
RIPPLY3P57055 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
RIPPLY3P57055 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RIPPLY3P57055 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIPPLY3P57055 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPPLY3P57055 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPPLY3P57055 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.4■□□□□ 0.38
RIPPLY3P57055 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPPLY3P57055 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPPLY3P57055 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.4■□□□□ 0.38
RIPPLY3P57055 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
RIPPLY3P57055 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPPLY3P57055 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIPPLY3P57055 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RIPPLY3P57055 AL450487.1-201ENST00000426799 995 ntBASIC17.4■□□□□ 0.38
RIPPLY3P57055 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.4■□□□□ 0.38
RIPPLY3P57055 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIPPLY3P57055 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.4■□□□□ 0.38
RIPPLY3P57055 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
RIPPLY3P57055 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.4■□□□□ 0.38
RIPPLY3P57055 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.4■□□□□ 0.38
RIPPLY3P57055 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.4■□□□□ 0.38
RIPPLY3P57055 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.4■□□□□ 0.38
RIPPLY3P57055 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RIPPLY3P57055 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RIPPLY3P57055 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RIPPLY3P57055 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPPLY3P57055 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.39■□□□□ 0.37
RIPPLY3P57055 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPPLY3P57055 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPPLY3P57055 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.39■□□□□ 0.37
RIPPLY3P57055 LSM12P1-201ENST00000411836 588 ntBASIC17.39■□□□□ 0.37
RIPPLY3P57055 AC113347.1-201ENST00000413321 391 ntBASIC17.39■□□□□ 0.37
RIPPLY3P57055 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIPPLY3P57055 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.39■□□□□ 0.37
RIPPLY3P57055 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.39■□□□□ 0.37
RIPPLY3P57055 DUX4L26-201ENST00000489078 1255 ntBASIC17.39■□□□□ 0.37
RIPPLY3P57055 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RIPPLY3P57055 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RIPPLY3P57055 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RIPPLY3P57055 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.39■□□□□ 0.37
RIPPLY3P57055 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RIPPLY3P57055 AC113410.3-201ENST00000623366 203 ntBASIC17.39■□□□□ 0.37
RIPPLY3P57055 AL024507.2-201ENST00000606070 2574 ntBASIC17.39■□□□□ 0.37
RIPPLY3P57055 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RIPPLY3P57055 AC012676.1-201ENST00000574705 1949 ntBASIC17.39■□□□□ 0.37
RIPPLY3P57055 AC009237.3-201ENST00000393279 1427 ntBASIC17.38■□□□□ 0.37
RIPPLY3P57055 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RIPPLY3P57055 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPPLY3P57055 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.38■□□□□ 0.37
RIPPLY3P57055 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
RIPPLY3P57055 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPPLY3P57055 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPPLY3P57055 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.38■□□□□ 0.37
RIPPLY3P57055 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RIPPLY3P57055 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.38■□□□□ 0.37
RIPPLY3P57055 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RIPPLY3P57055 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.38■□□□□ 0.37
RIPPLY3P57055 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.38■□□□□ 0.37
RIPPLY3P57055 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.38■□□□□ 0.37
RIPPLY3P57055 AC233263.1-201ENST00000578059 224 ntBASIC17.38■□□□□ 0.37
RIPPLY3P57055 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RIPPLY3P57055 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.38■□□□□ 0.37
RIPPLY3P57055 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.38■□□□□ 0.37
RIPPLY3P57055 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.38■□□□□ 0.37
RIPPLY3P57055 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPPLY3P57055 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.37■□□□□ 0.37
RIPPLY3P57055 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPPLY3P57055 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPPLY3P57055 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPPLY3P57055 ERN1-208ENST00000606895 2068 ntBASIC17.37■□□□□ 0.37
RIPPLY3P57055 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPPLY3P57055 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPPLY3P57055 KRT18P57-201ENST00000443599 1254 ntBASIC17.37■□□□□ 0.37
RIPPLY3P57055 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RIPPLY3P57055 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.37■□□□□ 0.37
RIPPLY3P57055 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPPLY3P57055 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.37■□□□□ 0.37
RIPPLY3P57055 MIR6786-201ENST00000616843 113 ntBASIC17.37■□□□□ 0.37
RIPPLY3P57055 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPPLY3P57055 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.37■□□□□ 0.37
RIPPLY3P57055 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RIPPLY3P57055 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RIPPLY3P57055 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.36■□□□□ 0.37
RIPPLY3P57055 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RIPPLY3P57055 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPPLY3P57055 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPPLY3P57055 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RIPPLY3P57055 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms