Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH12P55289 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CDH12P55289 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CDH12P55289 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH12P55289 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.53■□□□□ 0.72
CDH12P55289 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH12P55289 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH12P55289 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH12P55289 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.52■□□□□ 0.72
CDH12P55289 AP004607.7-201ENST00000527152 1677 ntBASIC19.52■□□□□ 0.72
CDH12P55289 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH12P55289 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH12P55289 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH12P55289 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH12P55289 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH12P55289 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH12P55289 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH12P55289 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH12P55289 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CDH12P55289 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CDH12P55289 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDH12P55289 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH12P55289 BX842568.3-201ENST00000418104 571 ntBASIC19.52■□□□□ 0.72
CDH12P55289 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH12P55289 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.52■□□□□ 0.72
CDH12P55289 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.52■□□□□ 0.72
CDH12P55289 AC024257.2-201ENST00000549699 147 ntBASIC19.52■□□□□ 0.72
CDH12P55289 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH12P55289 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.52■□□□□ 0.72
CDH12P55289 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH12P55289 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CDH12P55289 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDH12P55289 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDH12P55289 FEM1AP1-201ENST00000431297 1995 ntBASIC19.52■□□□□ 0.71
CDH12P55289 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.51■□□□□ 0.71
CDH12P55289 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.51■□□□□ 0.71
CDH12P55289 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.51■□□□□ 0.71
CDH12P55289 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CDH12P55289 AL136162.1-201ENST00000607711 1078 ntBASIC19.51■□□□□ 0.71
CDH12P55289 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
CDH12P55289 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
CDH12P55289 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.51■□□□□ 0.71
CDH12P55289 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CDH12P55289 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CDH12P55289 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH12P55289 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.51■□□□□ 0.71
CDH12P55289 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH12P55289 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH12P55289 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CDH12P55289 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH12P55289 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH12P55289 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH12P55289 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.5■□□□□ 0.71
CDH12P55289 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH12P55289 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH12P55289 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.49■□□□□ 0.71
CDH12P55289 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH12P55289 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH12P55289 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.49■□□□□ 0.71
CDH12P55289 AC233992.3-201ENST00000607491 485 ntBASIC19.49■□□□□ 0.71
CDH12P55289 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH12P55289 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CDH12P55289 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CDH12P55289 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH12P55289 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH12P55289 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH12P55289 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.49■□□□□ 0.71
CDH12P55289 AC135279.3-201ENST00000610945 1311 ntBASIC19.49■□□□□ 0.71
CDH12P55289 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH12P55289 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.48■□□□□ 0.71
CDH12P55289 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH12P55289 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH12P55289 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms