Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CASP9P55211 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASP9P55211 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
CASP9P55211 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASP9P55211 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASP9P55211 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASP9P55211 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.82■□□□□ 0.76
CASP9P55211 AP001330.3-201ENST00000520123 633 ntBASIC19.82■□□□□ 0.76
CASP9P55211 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASP9P55211 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.82■□□□□ 0.76
CASP9P55211 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASP9P55211 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASP9P55211 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASP9P55211 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.82■□□□□ 0.76
CASP9P55211 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASP9P55211 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CASP9P55211 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CASP9P55211 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASP9P55211 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASP9P55211 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASP9P55211 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASP9P55211 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CASP9P55211 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASP9P55211 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASP9P55211 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.81■□□□□ 0.76
CASP9P55211 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CASP9P55211 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.81■□□□□ 0.76
CASP9P55211 AC105233.4-201ENST00000642045 216 ntBASIC19.81■□□□□ 0.76
CASP9P55211 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASP9P55211 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
CASP9P55211 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CASP9P55211 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASP9P55211 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.81■□□□□ 0.76
CASP9P55211 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASP9P55211 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CASP9P55211 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASP9P55211 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
CASP9P55211 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
CASP9P55211 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASP9P55211 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASP9P55211 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASP9P55211 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASP9P55211 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CASP9P55211 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.8■□□□□ 0.76
CASP9P55211 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASP9P55211 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASP9P55211 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CASP9P55211 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.8■□□□□ 0.76
CASP9P55211 AC027682.1-201ENST00000562846 899 ntBASIC19.8■□□□□ 0.76
CASP9P55211 AF213884.3-201ENST00000563833 479 ntBASIC19.8■□□□□ 0.76
CASP9P55211 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.8■□□□□ 0.76
CASP9P55211 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CASP9P55211 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
CASP9P55211 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASP9P55211 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.8■□□□□ 0.76
CASP9P55211 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASP9P55211 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASP9P55211 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASP9P55211 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CASP9P55211 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASP9P55211 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.79■□□□□ 0.76
CASP9P55211 MIR638-201ENST00000385237 100 ntBASIC19.79■□□□□ 0.76
CASP9P55211 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASP9P55211 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.79■□□□□ 0.76
CASP9P55211 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.79■□□□□ 0.76
CASP9P55211 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.79■□□□□ 0.76
CASP9P55211 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.79■□□□□ 0.76
CASP9P55211 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CASP9P55211 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.79■□□□□ 0.76
CASP9P55211 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASP9P55211 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.78■□□□□ 0.76
CASP9P55211 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASP9P55211 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASP9P55211 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.78■□□□□ 0.76
CASP9P55211 AL049796.1-201ENST00000565336 1766 ntBASIC19.78■□□□□ 0.76
CASP9P55211 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.78■□□□□ 0.76
CASP9P55211 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.78■□□□□ 0.76
CASP9P55211 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASP9P55211 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASP9P55211 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASP9P55211 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.77■□□□□ 0.76
CASP9P55211 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP9P55211 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP9P55211 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CASP9P55211 AC073130.3-201ENST00000624389 2278 ntBASIC19.77■□□□□ 0.76
CASP9P55211 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASP9P55211 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASP9P55211 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.77■□□□□ 0.76
CASP9P55211 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CASP9P55211 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASP9P55211 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.77■□□□□ 0.76
CASP9P55211 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.77■□□□□ 0.76
CASP9P55211 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.77■□□□□ 0.76
CASP9P55211 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASP9P55211 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASP9P55211 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.77■□□□□ 0.76
CASP9P55211 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CASP9P55211 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CASP9P55211 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP9P55211 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms