Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.73■■□□□ 1.71
PDE1AP54750 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PDE1AP54750 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.73■■□□□ 1.71
PDE1AP54750 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PDE1AP54750 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PDE1AP54750 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PDE1AP54750 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PDE1AP54750 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.72■■□□□ 1.71
PDE1AP54750 KRT18P14-201ENST00000534205 1250 ntBASIC25.72■■□□□ 1.71
PDE1AP54750 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.72■■□□□ 1.71
PDE1AP54750 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PDE1AP54750 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PDE1AP54750 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
PDE1AP54750 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC25.72■■□□□ 1.71
PDE1AP54750 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.71■■□□□ 1.71
PDE1AP54750 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDE1AP54750 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDE1AP54750 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDE1AP54750 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
PDE1AP54750 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDE1AP54750 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
PDE1AP54750 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PDE1AP54750 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.71■■□□□ 1.71
PDE1AP54750 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.71■■□□□ 1.71
PDE1AP54750 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDE1AP54750 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
PDE1AP54750 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
PDE1AP54750 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PDE1AP54750 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PDE1AP54750 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PDE1AP54750 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.7■■□□□ 1.7
PDE1AP54750 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.7
PDE1AP54750 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.7■■□□□ 1.7
PDE1AP54750 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.7■■□□□ 1.7
PDE1AP54750 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.7■■□□□ 1.7
PDE1AP54750 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.7■■□□□ 1.7
PDE1AP54750 AC138907.5-202ENST00000569484 235 ntBASIC25.7■■□□□ 1.7
PDE1AP54750 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.7■■□□□ 1.7
PDE1AP54750 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PDE1AP54750 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
PDE1AP54750 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.7■■□□□ 1.7
PDE1AP54750 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PDE1AP54750 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
PDE1AP54750 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDE1AP54750 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.69■■□□□ 1.7
PDE1AP54750 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDE1AP54750 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.69■■□□□ 1.7
PDE1AP54750 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDE1AP54750 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
PDE1AP54750 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDE1AP54750 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDE1AP54750 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.69■■□□□ 1.7
PDE1AP54750 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PDE1AP54750 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDE1AP54750 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDE1AP54750 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.68■■□□□ 1.7
PDE1AP54750 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDE1AP54750 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
PDE1AP54750 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
PDE1AP54750 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PDE1AP54750 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDE1AP54750 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.68■■□□□ 1.7
PDE1AP54750 KRT18P61-201ENST00000585825 1298 ntBASIC25.68■■□□□ 1.7
PDE1AP54750 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PDE1AP54750 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.68■■□□□ 1.7
PDE1AP54750 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PDE1AP54750 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
PDE1AP54750 AP004607.4-201ENST00000530158 1459 ntBASIC25.67■■□□□ 1.7
PDE1AP54750 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
PDE1AP54750 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.67■■□□□ 1.7
PDE1AP54750 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDE1AP54750 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.67■■□□□ 1.7
PDE1AP54750 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
PDE1AP54750 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDE1AP54750 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PDE1AP54750 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.67■■□□□ 1.7
PDE1AP54750 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDE1AP54750 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.67■■□□□ 1.7
PDE1AP54750 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDE1AP54750 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
PDE1AP54750 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDE1AP54750 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDE1AP54750 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDE1AP54750 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDE1AP54750 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDE1AP54750 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDE1AP54750 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDE1AP54750 DUX4L2-201ENST00000561772 1275 ntBASIC25.66■■□□□ 1.7
PDE1AP54750 AC104187.1-201ENST00000607510 612 ntBASIC25.66■■□□□ 1.7
PDE1AP54750 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.66■■□□□ 1.7
PDE1AP54750 DUX4L6-201ENST00000626483 1275 ntBASIC25.66■■□□□ 1.7
PDE1AP54750 DUX4L1-201ENST00000627662 1275 ntBASIC25.66■■□□□ 1.7
PDE1AP54750 DUX4L8-201ENST00000629013 1275 ntBASIC25.66■■□□□ 1.7
PDE1AP54750 DUX4L3-201ENST00000630187 1275 ntBASIC25.66■■□□□ 1.7
PDE1AP54750 DUX4L7-201ENST00000630678 1275 ntBASIC25.66■■□□□ 1.7
PDE1AP54750 DUX4L5-201ENST00000630834 1275 ntBASIC25.66■■□□□ 1.7
PDE1AP54750 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.66■■□□□ 1.7
PDE1AP54750 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.66■■□□□ 1.7
PDE1AP54750 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDE1AP54750 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms