Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUBP1P53384 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
NUBP1P53384 MCRIP2P1-201ENST00000394346 511 ntBASIC21.13■□□□□ 0.97
NUBP1P53384 CDV3P1-201ENST00000471403 739 ntBASIC21.13■□□□□ 0.97
NUBP1P53384 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.13■□□□□ 0.97
NUBP1P53384 RARRES2P10-201ENST00000564312 460 ntBASIC21.13■□□□□ 0.97
NUBP1P53384 C2orf69P4-201ENST00000565394 541 ntBASIC21.13■□□□□ 0.97
NUBP1P53384 AC124016.1-201ENST00000609552 612 ntBASIC21.13■□□□□ 0.97
NUBP1P53384 AC113410.3-201ENST00000623366 203 ntBASIC21.13■□□□□ 0.97
NUBP1P53384 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUBP1P53384 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUBP1P53384 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUBP1P53384 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUBP1P53384 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUBP1P53384 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUBP1P53384 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.12■□□□□ 0.97
NUBP1P53384 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NUBP1P53384 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NUBP1P53384 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUBP1P53384 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUBP1P53384 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NUBP1P53384 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUBP1P53384 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.12■□□□□ 0.97
NUBP1P53384 AL355075.4-201ENST00000554988 638 ntBASIC21.12■□□□□ 0.97
NUBP1P53384 MTDHP1-201ENST00000605323 784 ntBASIC21.12■□□□□ 0.97
NUBP1P53384 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUBP1P53384 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUBP1P53384 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.12■□□□□ 0.97
NUBP1P53384 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NUBP1P53384 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NUBP1P53384 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.11■□□□□ 0.97
NUBP1P53384 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NUBP1P53384 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NUBP1P53384 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NUBP1P53384 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.11■□□□□ 0.97
NUBP1P53384 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
NUBP1P53384 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.11■□□□□ 0.97
NUBP1P53384 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NUBP1P53384 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.11■□□□□ 0.97
NUBP1P53384 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
NUBP1P53384 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.11■□□□□ 0.97
NUBP1P53384 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.11■□□□□ 0.97
NUBP1P53384 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.11■□□□□ 0.97
NUBP1P53384 AC110285.5-201ENST00000611501 352 ntBASIC21.11■□□□□ 0.97
NUBP1P53384 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.11■□□□□ 0.97
NUBP1P53384 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NUBP1P53384 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.11■□□□□ 0.97
NUBP1P53384 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NUBP1P53384 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NUBP1P53384 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NUBP1P53384 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NUBP1P53384 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NUBP1P53384 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NUBP1P53384 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NUBP1P53384 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NUBP1P53384 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NUBP1P53384 TSPY15P-201ENST00000457163 923 ntBASIC21.1■□□□□ 0.97
NUBP1P53384 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NUBP1P53384 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.1■□□□□ 0.97
NUBP1P53384 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.1■□□□□ 0.97
NUBP1P53384 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.1■□□□□ 0.97
NUBP1P53384 LINC00543-201ENST00000567234 1845 ntBASIC21.1■□□□□ 0.97
NUBP1P53384 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NUBP1P53384 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
NUBP1P53384 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NUBP1P53384 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUBP1P53384 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.09■□□□□ 0.97
NUBP1P53384 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUBP1P53384 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.09■□□□□ 0.97
NUBP1P53384 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.09■□□□□ 0.97
NUBP1P53384 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.09■□□□□ 0.97
NUBP1P53384 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NUBP1P53384 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.09■□□□□ 0.97
NUBP1P53384 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.09■□□□□ 0.97
NUBP1P53384 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.09■□□□□ 0.97
NUBP1P53384 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
NUBP1P53384 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
NUBP1P53384 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
NUBP1P53384 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NUBP1P53384 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.08■□□□□ 0.97
NUBP1P53384 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
NUBP1P53384 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NUBP1P53384 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.08■□□□□ 0.97
NUBP1P53384 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NUBP1P53384 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.08■□□□□ 0.97
NUBP1P53384 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
NUBP1P53384 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.08■□□□□ 0.97
NUBP1P53384 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NUBP1P53384 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NUBP1P53384 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.08■□□□□ 0.97
NUBP1P53384 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.08■□□□□ 0.97
NUBP1P53384 AL353708.3-201ENST00000610272 989 ntBASIC21.08■□□□□ 0.97
NUBP1P53384 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NUBP1P53384 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.08■□□□□ 0.96
NUBP1P53384 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUBP1P53384 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
NUBP1P53384 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NUBP1P53384 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.07■□□□□ 0.96
NUBP1P53384 MMP23A-201ENST00000234610 1017 ntBASIC21.07■□□□□ 0.96
NUBP1P53384 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms