Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.87■■□□□ 1.41
USP11P51784 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.87■■□□□ 1.41
USP11P51784 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.87■■□□□ 1.41
USP11P51784 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.87■■□□□ 1.41
USP11P51784 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.87■■□□□ 1.41
USP11P51784 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.86■■□□□ 1.41
USP11P51784 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
USP11P51784 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.86■■□□□ 1.41
USP11P51784 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
USP11P51784 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
USP11P51784 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
USP11P51784 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.86■■□□□ 1.41
USP11P51784 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.86■■□□□ 1.41
USP11P51784 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
USP11P51784 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
USP11P51784 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.86■■□□□ 1.41
USP11P51784 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
USP11P51784 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
USP11P51784 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
USP11P51784 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
USP11P51784 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.85■■□□□ 1.41
USP11P51784 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
USP11P51784 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
USP11P51784 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
USP11P51784 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
USP11P51784 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
USP11P51784 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
USP11P51784 AC004911.1-201ENST00000416316 871 ntBASIC23.85■■□□□ 1.41
USP11P51784 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
USP11P51784 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.85■■□□□ 1.41
USP11P51784 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
USP11P51784 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.85■■□□□ 1.41
USP11P51784 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
USP11P51784 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
USP11P51784 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
USP11P51784 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
USP11P51784 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP11P51784 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
USP11P51784 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP11P51784 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
USP11P51784 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.84■■□□□ 1.41
USP11P51784 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
USP11P51784 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.84■■□□□ 1.41
USP11P51784 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.84■■□□□ 1.41
USP11P51784 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.84■■□□□ 1.41
USP11P51784 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
USP11P51784 BID-214ENST00000617586 542 ntTSL 5 BASIC23.84■■□□□ 1.41
USP11P51784 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.84■■□□□ 1.41
USP11P51784 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP11P51784 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.83■■□□□ 1.41
USP11P51784 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.83■■□□□ 1.41
USP11P51784 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.83■■□□□ 1.41
USP11P51784 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.83■■□□□ 1.41
USP11P51784 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.83■■□□□ 1.41
USP11P51784 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.83■■□□□ 1.41
USP11P51784 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.83■■□□□ 1.41
USP11P51784 AC011767.1-201ENST00000617410 1153 ntBASIC23.83■■□□□ 1.41
USP11P51784 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.83■■□□□ 1.41
USP11P51784 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP11P51784 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP11P51784 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
USP11P51784 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP11P51784 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
USP11P51784 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP11P51784 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.82■■□□□ 1.4
USP11P51784 MFSD11-216ENST00000590393 1141 ntBASIC23.82■■□□□ 1.4
USP11P51784 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP11P51784 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP11P51784 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP11P51784 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP11P51784 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP11P51784 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.81■■□□□ 1.4
USP11P51784 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP11P51784 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP11P51784 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP11P51784 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.81■■□□□ 1.4
USP11P51784 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP11P51784 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP11P51784 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP11P51784 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP11P51784 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP11P51784 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.8■■□□□ 1.4
USP11P51784 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.8■■□□□ 1.4
USP11P51784 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP11P51784 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP11P51784 Z98882.1-201ENST00000622160 2253 ntBASIC23.8■■□□□ 1.4
USP11P51784 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
USP11P51784 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP11P51784 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP11P51784 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP11P51784 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP11P51784 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP11P51784 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP11P51784 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.79■■□□□ 1.4
USP11P51784 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP11P51784 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.79■■□□□ 1.4
USP11P51784 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP11P51784 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
USP11P51784 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.79■■□□□ 1.4
USP11P51784 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms