Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ARCN1P48444 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.06■□□□□ 0.96
ARCN1P48444 MIR5787-201ENST00000611784 55 ntBASIC21.06■□□□□ 0.96
ARCN1P48444 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARCN1P48444 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARCN1P48444 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ARCN1P48444 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ARCN1P48444 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.05■□□□□ 0.96
ARCN1P48444 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ARCN1P48444 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARCN1P48444 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.05■□□□□ 0.96
ARCN1P48444 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARCN1P48444 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.05■□□□□ 0.96
ARCN1P48444 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.05■□□□□ 0.96
ARCN1P48444 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARCN1P48444 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.05■□□□□ 0.96
ARCN1P48444 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.05■□□□□ 0.96
ARCN1P48444 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.05■□□□□ 0.96
ARCN1P48444 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.05■□□□□ 0.96
ARCN1P48444 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ARCN1P48444 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.05■□□□□ 0.96
ARCN1P48444 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARCN1P48444 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.05■□□□□ 0.96
ARCN1P48444 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.04■□□□□ 0.96
ARCN1P48444 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.04■□□□□ 0.96
ARCN1P48444 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARCN1P48444 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARCN1P48444 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.04■□□□□ 0.96
ARCN1P48444 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARCN1P48444 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARCN1P48444 YBX1P1-201ENST00000445822 960 ntBASIC21.04■□□□□ 0.96
ARCN1P48444 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.04■□□□□ 0.96
ARCN1P48444 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.04■□□□□ 0.96
ARCN1P48444 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.04■□□□□ 0.96
ARCN1P48444 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.04■□□□□ 0.96
ARCN1P48444 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.04■□□□□ 0.96
ARCN1P48444 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARCN1P48444 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ARCN1P48444 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARCN1P48444 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ARCN1P48444 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARCN1P48444 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ARCN1P48444 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARCN1P48444 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARCN1P48444 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARCN1P48444 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARCN1P48444 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARCN1P48444 EEF1DP3-203ENST00000566025 782 ntBASIC21.03■□□□□ 0.96
ARCN1P48444 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.03■□□□□ 0.96
ARCN1P48444 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ARCN1P48444 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ARCN1P48444 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARCN1P48444 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARCN1P48444 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARCN1P48444 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARCN1P48444 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ARCN1P48444 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ARCN1P48444 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARCN1P48444 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARCN1P48444 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARCN1P48444 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARCN1P48444 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARCN1P48444 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARCN1P48444 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARCN1P48444 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARCN1P48444 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.02■□□□□ 0.96
ARCN1P48444 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARCN1P48444 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ARCN1P48444 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARCN1P48444 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.02■□□□□ 0.96
ARCN1P48444 AC027612.3-201ENST00000413684 1047 ntBASIC21.02■□□□□ 0.96
ARCN1P48444 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARCN1P48444 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARCN1P48444 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ARCN1P48444 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARCN1P48444 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.02■□□□□ 0.95
ARCN1P48444 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ARCN1P48444 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.02■□□□□ 0.95
ARCN1P48444 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.01■□□□□ 0.95
ARCN1P48444 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARCN1P48444 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARCN1P48444 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.01■□□□□ 0.95
ARCN1P48444 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARCN1P48444 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARCN1P48444 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARCN1P48444 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.01■□□□□ 0.95
ARCN1P48444 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARCN1P48444 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.01■□□□□ 0.95
ARCN1P48444 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.01■□□□□ 0.95
ARCN1P48444 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARCN1P48444 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
ARCN1P48444 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARCN1P48444 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
ARCN1P48444 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.01■□□□□ 0.95
ARCN1P48444 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21■□□□□ 0.95
ARCN1P48444 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARCN1P48444 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARCN1P48444 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21■□□□□ 0.95
ARCN1P48444 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARCN1P48444 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms