Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A3P43003 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A3P43003 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC1A3P43003 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A3P43003 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC1A3P43003 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC1A3P43003 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC1A3P43003 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC1A3P43003 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC1A3P43003 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC1A3P43003 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A3P43003 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A3P43003 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC1A3P43003 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC1A3P43003 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A3P43003 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A3P43003 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC1A3P43003 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A3P43003 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC1A3P43003 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC1A3P43003 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC1A3P43003 TPRG1LP1-201ENST00000598702 760 ntBASIC19.28■□□□□ 0.68
SLC1A3P43003 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A3P43003 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A3P43003 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A3P43003 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A3P43003 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC1A3P43003 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A3P43003 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A3P43003 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A3P43003 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLC1A3P43003 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A3P43003 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC1A3P43003 MIR6084-201ENST00000622012 110 ntBASIC19.27■□□□□ 0.68
SLC1A3P43003 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A3P43003 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC1A3P43003 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC1A3P43003 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A3P43003 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SLC1A3P43003 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A3P43003 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A3P43003 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A3P43003 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A3P43003 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A3P43003 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SLC1A3P43003 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC1A3P43003 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC1A3P43003 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
SLC1A3P43003 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A3P43003 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A3P43003 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A3P43003 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC1A3P43003 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC1A3P43003 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC1A3P43003 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC1A3P43003 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC1A3P43003 AC027612.3-201ENST00000413684 1047 ntBASIC19.25■□□□□ 0.67
SLC1A3P43003 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC1A3P43003 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SLC1A3P43003 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC1A3P43003 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A3P43003 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
SLC1A3P43003 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC1A3P43003 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC1A3P43003 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A3P43003 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A3P43003 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SLC1A3P43003 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC1A3P43003 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC1A3P43003 AL157384.1-201ENST00000445995 2473 ntBASIC19.24■□□□□ 0.67
SLC1A3P43003 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SLC1A3P43003 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A3P43003 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms