Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.17■■□□□ 1.14
CHKAP35790 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.17■■□□□ 1.14
CHKAP35790 RARRES2P11-201ENST00000635158 484 ntBASIC22.17■■□□□ 1.14
CHKAP35790 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.17■■□□□ 1.14
CHKAP35790 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.17■■□□□ 1.14
CHKAP35790 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHKAP35790 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHKAP35790 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHKAP35790 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHKAP35790 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHKAP35790 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CHKAP35790 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.16■■□□□ 1.14
CHKAP35790 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHKAP35790 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHKAP35790 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHKAP35790 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHKAP35790 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.16■■□□□ 1.14
CHKAP35790 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHKAP35790 AC006015.1-201ENST00000429970 570 ntBASIC22.16■■□□□ 1.14
CHKAP35790 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.16■■□□□ 1.14
CHKAP35790 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.16■■□□□ 1.14
CHKAP35790 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CHKAP35790 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.16■■□□□ 1.14
CHKAP35790 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CHKAP35790 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.16■■□□□ 1.14
CHKAP35790 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.16■■□□□ 1.14
CHKAP35790 AF106564.1-201ENST00000607058 2553 ntBASIC22.16■■□□□ 1.14
CHKAP35790 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHKAP35790 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CHKAP35790 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHKAP35790 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.15■■□□□ 1.14
CHKAP35790 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.15■■□□□ 1.14
CHKAP35790 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHKAP35790 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.15■■□□□ 1.14
CHKAP35790 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHKAP35790 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.15■■□□□ 1.14
CHKAP35790 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.15■■□□□ 1.14
CHKAP35790 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.15■■□□□ 1.14
CHKAP35790 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.15■■□□□ 1.14
CHKAP35790 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHKAP35790 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHKAP35790 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHKAP35790 Z98882.1-201ENST00000622160 2253 ntBASIC22.15■■□□□ 1.14
CHKAP35790 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.15■■□□□ 1.14
CHKAP35790 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHKAP35790 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CHKAP35790 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHKAP35790 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHKAP35790 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CHKAP35790 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHKAP35790 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHKAP35790 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
CHKAP35790 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CHKAP35790 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHKAP35790 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
CHKAP35790 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHKAP35790 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHKAP35790 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.14■■□□□ 1.13
CHKAP35790 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.14■■□□□ 1.13
CHKAP35790 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.14■■□□□ 1.13
CHKAP35790 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.14■■□□□ 1.13
CHKAP35790 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHKAP35790 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.14■■□□□ 1.13
CHKAP35790 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHKAP35790 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHKAP35790 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.14■■□□□ 1.13
CHKAP35790 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHKAP35790 SLC25A24-204ENST00000569674 2357 ntBASIC22.13■■□□□ 1.13
CHKAP35790 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CHKAP35790 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHKAP35790 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.13■■□□□ 1.13
CHKAP35790 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.13■■□□□ 1.13
CHKAP35790 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CHKAP35790 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.13■■□□□ 1.13
CHKAP35790 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHKAP35790 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHKAP35790 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CHKAP35790 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.13■■□□□ 1.13
CHKAP35790 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHKAP35790 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.12■■□□□ 1.13
CHKAP35790 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
CHKAP35790 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.12■■□□□ 1.13
CHKAP35790 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHKAP35790 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHKAP35790 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CHKAP35790 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHKAP35790 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHKAP35790 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHKAP35790 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.12■■□□□ 1.13
CHKAP35790 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CHKAP35790 KRT18P11-201ENST00000435214 1283 ntBASIC22.12■■□□□ 1.13
CHKAP35790 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.12■■□□□ 1.13
CHKAP35790 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHKAP35790 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHKAP35790 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.12■■□□□ 1.13
CHKAP35790 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CHKAP35790 AC026471.6-201ENST00000622954 1905 ntBASIC22.12■■□□□ 1.13
CHKAP35790 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.11■■□□□ 1.13
CHKAP35790 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHKAP35790 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms