Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 BX276092.2-201ENST00000417668 665 ntBASIC20.21■□□□□ 0.83
CCKBRP32239 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCKBRP32239 AL591742.1-201ENST00000604433 565 ntBASIC20.21■□□□□ 0.83
CCKBRP32239 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.21■□□□□ 0.83
CCKBRP32239 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.21■□□□□ 0.83
CCKBRP32239 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.21■□□□□ 0.83
CCKBRP32239 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCKBRP32239 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.21■□□□□ 0.83
CCKBRP32239 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CCKBRP32239 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCKBRP32239 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.2■□□□□ 0.82
CCKBRP32239 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.2■□□□□ 0.82
CCKBRP32239 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
CCKBRP32239 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.2■□□□□ 0.82
CCKBRP32239 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.2■□□□□ 0.82
CCKBRP32239 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.2■□□□□ 0.82
CCKBRP32239 MYC-209ENST00000641252 345 ntBASIC20.2■□□□□ 0.82
CCKBRP32239 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCKBRP32239 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCKBRP32239 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.2■□□□□ 0.82
CCKBRP32239 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.2■□□□□ 0.82
CCKBRP32239 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCKBRP32239 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCKBRP32239 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
CCKBRP32239 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCKBRP32239 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCKBRP32239 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCKBRP32239 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.19■□□□□ 0.82
CCKBRP32239 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.19■□□□□ 0.82
CCKBRP32239 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.19■□□□□ 0.82
CCKBRP32239 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.19■□□□□ 0.82
CCKBRP32239 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.19■□□□□ 0.82
CCKBRP32239 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.19■□□□□ 0.82
CCKBRP32239 AC008687.6-201ENST00000596318 630 ntBASIC20.19■□□□□ 0.82
CCKBRP32239 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCKBRP32239 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCKBRP32239 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CCKBRP32239 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCKBRP32239 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCKBRP32239 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCKBRP32239 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCKBRP32239 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCKBRP32239 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.18■□□□□ 0.82
CCKBRP32239 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCKBRP32239 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCKBRP32239 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CCKBRP32239 AC139530.1-201ENST00000575312 1977 ntBASIC20.18■□□□□ 0.82
CCKBRP32239 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCKBRP32239 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCKBRP32239 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.18■□□□□ 0.82
CCKBRP32239 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCKBRP32239 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCKBRP32239 KRT18P29-201ENST00000397031 1267 ntBASIC20.18■□□□□ 0.82
CCKBRP32239 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCKBRP32239 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCKBRP32239 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.18■□□□□ 0.82
CCKBRP32239 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCKBRP32239 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.18■□□□□ 0.82
CCKBRP32239 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCKBRP32239 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCKBRP32239 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.18■□□□□ 0.82
CCKBRP32239 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCKBRP32239 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCKBRP32239 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.17■□□□□ 0.82
CCKBRP32239 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCKBRP32239 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.17■□□□□ 0.82
CCKBRP32239 AC097658.1-201ENST00000475555 843 ntBASIC20.17■□□□□ 0.82
CCKBRP32239 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.17■□□□□ 0.82
CCKBRP32239 RARRES2P4-201ENST00000514074 484 ntBASIC20.17■□□□□ 0.82
CCKBRP32239 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.17■□□□□ 0.82
CCKBRP32239 AC083880.1-201ENST00000608266 535 ntBASIC20.17■□□□□ 0.82
CCKBRP32239 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCKBRP32239 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCKBRP32239 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCKBRP32239 C9orf163-202ENST00000624034 2573 ntBASIC20.17■□□□□ 0.82
CCKBRP32239 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCKBRP32239 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.17■□□□□ 0.82
CCKBRP32239 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCKBRP32239 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCKBRP32239 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCKBRP32239 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCKBRP32239 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCKBRP32239 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCKBRP32239 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCKBRP32239 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCKBRP32239 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCKBRP32239 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.16■□□□□ 0.82
CCKBRP32239 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.16■□□□□ 0.82
CCKBRP32239 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.16■□□□□ 0.82
CCKBRP32239 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCKBRP32239 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCKBRP32239 AC010980.2-201ENST00000587099 1412 ntBASIC20.16■□□□□ 0.82
CCKBRP32239 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCKBRP32239 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCKBRP32239 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.16■□□□□ 0.82
CCKBRP32239 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCKBRP32239 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCKBRP32239 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCKBRP32239 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCKBRP32239 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms