Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
SLC6A4P31645 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A4P31645 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A4P31645 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SLC6A4P31645 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.66■■□□□ 1.06
SLC6A4P31645 TERF1P5-201ENST00000477545 1207 ntBASIC21.66■■□□□ 1.06
SLC6A4P31645 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.66■■□□□ 1.06
SLC6A4P31645 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC6A4P31645 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SLC6A4P31645 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC6A4P31645 AC231657.2-201ENST00000624556 255 ntBASIC21.66■■□□□ 1.06
SLC6A4P31645 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SLC6A4P31645 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A4P31645 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A4P31645 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.66■■□□□ 1.06
SLC6A4P31645 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A4P31645 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A4P31645 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A4P31645 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A4P31645 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A4P31645 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC6A4P31645 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A4P31645 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A4P31645 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A4P31645 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A4P31645 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
SLC6A4P31645 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC6A4P31645 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A4P31645 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC6A4P31645 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A4P31645 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.65■■□□□ 1.06
SLC6A4P31645 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.65■■□□□ 1.06
SLC6A4P31645 AL050303.2-201ENST00000619798 666 ntBASIC21.65■■□□□ 1.06
SLC6A4P31645 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
SLC6A4P31645 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC6A4P31645 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC6A4P31645 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A4P31645 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC6A4P31645 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A4P31645 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A4P31645 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC6A4P31645 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.64■■□□□ 1.06
SLC6A4P31645 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SLC6A4P31645 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC6A4P31645 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A4P31645 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A4P31645 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SLC6A4P31645 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A4P31645 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A4P31645 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.64■■□□□ 1.05
SLC6A4P31645 AC007322.1-201ENST00000426983 750 ntBASIC21.64■■□□□ 1.05
SLC6A4P31645 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.64■■□□□ 1.05
SLC6A4P31645 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.64■■□□□ 1.05
SLC6A4P31645 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A4P31645 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A4P31645 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SLC6A4P31645 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A4P31645 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A4P31645 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
SLC6A4P31645 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC6A4P31645 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A4P31645 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.63■■□□□ 1.05
SLC6A4P31645 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A4P31645 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A4P31645 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SLC6A4P31645 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A4P31645 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A4P31645 AC006970.2-201ENST00000450065 779 ntBASIC21.63■■□□□ 1.05
SLC6A4P31645 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.63■■□□□ 1.05
SLC6A4P31645 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A4P31645 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A4P31645 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SLC6A4P31645 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A4P31645 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SLC6A4P31645 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC6A4P31645 RBM17P2-201ENST00000616397 1405 ntBASIC21.63■■□□□ 1.05
SLC6A4P31645 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
SLC6A4P31645 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
SLC6A4P31645 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC6A4P31645 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A4P31645 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.62■■□□□ 1.05
SLC6A4P31645 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.62■■□□□ 1.05
SLC6A4P31645 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.62■■□□□ 1.05
SLC6A4P31645 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A4P31645 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A4P31645 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A4P31645 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.62■■□□□ 1.05
SLC6A4P31645 ID1-201ENST00000376105 1233 ntBASIC21.62■■□□□ 1.05
SLC6A4P31645 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
SLC6A4P31645 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC6A4P31645 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC6A4P31645 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.62■■□□□ 1.05
SLC6A4P31645 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A4P31645 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A4P31645 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
SLC6A4P31645 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A4P31645 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC6A4P31645 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC6A4P31645 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SLC6A4P31645 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms