Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN6P29350 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN6P29350 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN6P29350 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN6P29350 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN6P29350 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN6P29350 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN6P29350 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN6P29350 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN6P29350 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN6P29350 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.93■□□□□ 0.78
PTPN6P29350 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.93■□□□□ 0.78
PTPN6P29350 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN6P29350 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.93■□□□□ 0.78
PTPN6P29350 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN6P29350 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.93■□□□□ 0.78
PTPN6P29350 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN6P29350 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.93■□□□□ 0.78
PTPN6P29350 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.93■□□□□ 0.78
PTPN6P29350 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.92■□□□□ 0.78
PTPN6P29350 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN6P29350 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN6P29350 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN6P29350 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN6P29350 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.92■□□□□ 0.78
PTPN6P29350 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PTPN6P29350 MIR572-201ENST00000384983 95 ntBASIC19.92■□□□□ 0.78
PTPN6P29350 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN6P29350 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN6P29350 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN6P29350 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.92■□□□□ 0.78
PTPN6P29350 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.92■□□□□ 0.78
PTPN6P29350 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN6P29350 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.92■□□□□ 0.78
PTPN6P29350 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.92■□□□□ 0.78
PTPN6P29350 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN6P29350 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.91■□□□□ 0.78
PTPN6P29350 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 FEM1AP1-201ENST00000431297 1995 ntBASIC19.91■□□□□ 0.78
PTPN6P29350 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.91■□□□□ 0.78
PTPN6P29350 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN6P29350 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PTPN6P29350 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.9■□□□□ 0.78
PTPN6P29350 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN6P29350 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PTPN6P29350 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
PTPN6P29350 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.9■□□□□ 0.78
PTPN6P29350 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN6P29350 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
PTPN6P29350 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PTPN6P29350 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 LINC01006-201ENST00000333319 2292 ntBASIC19.9■□□□□ 0.78
PTPN6P29350 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN6P29350 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN6P29350 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN6P29350 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN6P29350 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.89■□□□□ 0.77
PTPN6P29350 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN6P29350 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN6P29350 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.89■□□□□ 0.77
PTPN6P29350 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PTPN6P29350 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN6P29350 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN6P29350 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN6P29350 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PTPN6P29350 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN6P29350 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
PTPN6P29350 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN6P29350 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN6P29350 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN6P29350 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN6P29350 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN6P29350 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN6P29350 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN6P29350 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms