Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YGL108CYGL108C 423 nt4.69□□□□□ -1.66
MSH3P25336 YIL171WYIL171W 330 nt4.69□□□□□ -1.66
MSH3P25336 YNL276CYNL276C 396 nt4.69□□□□□ -1.66
MSH3P25336 SWM2YNR004W 441 nt4.69□□□□□ -1.66
MSH3P25336 AEP1YMR064W 1557 nt4.69□□□□□ -1.66
MSH3P25336 OSH2YDL019C 3852 nt4.69□□□□□ -1.66
MSH3P25336 SYF1YDR416W 2580 nt4.68□□□□□ -1.66
MSH3P25336 YKR078WYKR078W 1758 nt4.68□□□□□ -1.66
MSH3P25336 ATG2YNL242W 4779 nt4.68□□□□□ -1.66
MSH3P25336 DIP2YLR129W 2832 nt4.68□□□□□ -1.66
MSH3P25336 HNT1YDL125C 477 nt4.68□□□□□ -1.66
MSH3P25336 PMI40YER003C 1290 nt4.68□□□□□ -1.66
MSH3P25336 tQ(UUG)CtQ(UUG)C 72 nt4.68□□□□□ -1.66
MSH3P25336 tQ(UUG)D1tQ(UUG)D1 72 nt4.68□□□□□ -1.66
MSH3P25336 tQ(UUG)D2tQ(UUG)D2 72 nt4.68□□□□□ -1.66
MSH3P25336 tQ(UUG)D3tQ(UUG)D3 72 nt4.68□□□□□ -1.66
MSH3P25336 tQ(UUG)E1tQ(UUG)E1 72 nt4.68□□□□□ -1.66
MSH3P25336 tQ(UUG)HtQ(UUG)H 72 nt4.68□□□□□ -1.66
MSH3P25336 tQ(UUG)LtQ(UUG)L 72 nt4.68□□□□□ -1.66
MSH3P25336 YAP3YHL009C 993 nt4.68□□□□□ -1.66
MSH3P25336 SAE3YHR079C-A 276 nt4.68□□□□□ -1.66
MSH3P25336 EPT1YHR123W 1176 nt4.68□□□□□ -1.66
MSH3P25336 YJL127C-BYJL127C-B 159 nt4.68□□□□□ -1.66
MSH3P25336 VPS63YLR261C 327 nt4.68□□□□□ -1.66
MSH3P25336 YBL010CYBL010C 843 nt4.68□□□□□ -1.66
MSH3P25336 YBR242WYBR242W 717 nt4.68□□□□□ -1.66
MSH3P25336 LST4YKL176C 2487 nt4.68□□□□□ -1.66
MSH3P25336 RTC1YOL138C 4026 nt4.67□□□□□ -1.66
MSH3P25336 MUD2YKL074C 1584 nt4.67□□□□□ -1.66
MSH3P25336 YER068C-AYER068C-A 432 nt4.67□□□□□ -1.66
MSH3P25336 MRM2YGL136C 963 nt4.67□□□□□ -1.66
MSH3P25336 RPS20YHL015W 366 nt4.67□□□□□ -1.66
MSH3P25336 YIL014C-AYIL014C-A 315 nt4.67□□□□□ -1.66
MSH3P25336 AGE2YIL044C 897 nt4.67□□□□□ -1.66
MSH3P25336 DPH1YIL103W 1278 nt4.67□□□□□ -1.66
MSH3P25336 YIR020CYIR020C 303 nt4.67□□□□□ -1.66
MSH3P25336 MCR1YKL150W 909 nt4.67□□□□□ -1.66
MSH3P25336 RPS1AYLR441C 768 nt4.67□□□□□ -1.66
MSH3P25336 YOR053WYOR053W 342 nt4.67□□□□□ -1.66
MSH3P25336 MRPL40YPL173W 894 nt4.67□□□□□ -1.66
MSH3P25336 DER1YBR201W 636 nt4.67□□□□□ -1.66
MSH3P25336 snR54snR54 86 nt4.67□□□□□ -1.66
MSH3P25336 SEC2YNL272C 2280 nt4.67□□□□□ -1.66
MSH3P25336 PUT2YHR037W 1728 nt4.66□□□□□ -1.66
MSH3P25336 EXO5YBR163W 1758 nt4.66□□□□□ -1.66
MSH3P25336 SPT2YER161C 1002 nt4.66□□□□□ -1.66
MSH3P25336 AML1YGR001C 747 nt4.66□□□□□ -1.66
MSH3P25336 SOL4YGR248W 768 nt4.66□□□□□ -1.66
MSH3P25336 ENT3YJR125C 1227 nt4.66□□□□□ -1.66
MSH3P25336 RPL40BYKR094C 387 nt4.66□□□□□ -1.66
MSH3P25336 AFB1YLR040C 675 nt4.66□□□□□ -1.66
MSH3P25336 YHR214C-CYHR214C-C 1437 nt4.65□□□□□ -1.66
MSH3P25336 GIP4YAL031C 2283 nt4.65□□□□□ -1.66
MSH3P25336 PKP2YGL059W 1476 nt4.65□□□□□ -1.66
MSH3P25336 YDR115WYDR115W 318 nt4.65□□□□□ -1.67
MSH3P25336 YER046W-AYER046W-A 330 nt4.65□□□□□ -1.67
MSH3P25336 RTS3YGR161C 792 nt4.65□□□□□ -1.67
MSH3P25336 YIR020C-BYIR020C-B 735 nt4.65□□□□□ -1.67
MSH3P25336 YKL044WYKL044W 321 nt4.65□□□□□ -1.67
MSH3P25336 NKP2YLR315W 462 nt4.65□□□□□ -1.67
MSH3P25336 SUI1YNL244C 327 nt4.65□□□□□ -1.67
MSH3P25336 DIB1YPR082C 432 nt4.65□□□□□ -1.67
MSH3P25336 MSS18YPR134W 807 nt4.65□□□□□ -1.67
MSH3P25336 RPN3YER021W 1572 nt4.65□□□□□ -1.67
MSH3P25336 TAF12YDR145W 1620 nt4.64□□□□□ -1.67
MSH3P25336 MFA1YDR461W 111 nt4.64□□□□□ -1.67
MSH3P25336 SLD5YDR489W 885 nt4.64□□□□□ -1.67
MSH3P25336 VFA1YER128W 612 nt4.64□□□□□ -1.67
MSH3P25336 YER135CYER135C 393 nt4.64□□□□□ -1.67
MSH3P25336 RDN5-1RDN5-1 121 nt4.64□□□□□ -1.67
MSH3P25336 AIM29YKR074W 468 nt4.64□□□□□ -1.67
MSH3P25336 RDN5-6RDN5-6 121 nt4.64□□□□□ -1.67
MSH3P25336 FLD1YLR404W 858 nt4.64□□□□□ -1.67
MSH3P25336 YOR203WYOR203W 354 nt4.64□□□□□ -1.67
MSH3P25336 YPL035CYPL035C 348 nt4.64□□□□□ -1.67
MSH3P25336 TPK2YPL203W 1143 nt4.64□□□□□ -1.67
MSH3P25336 CMD1YBR109C 444 nt4.64□□□□□ -1.67
MSH3P25336 SHG1YBR258C 429 nt4.64□□□□□ -1.67
MSH3P25336 GLN4YOR168W 2430 nt4.64□□□□□ -1.67
MSH3P25336 VPS73YGL104C 1461 nt4.63□□□□□ -1.67
MSH3P25336 ADY4YLR227C 1482 nt4.63□□□□□ -1.67
MSH3P25336 SWF1YDR126W 1011 nt4.63□□□□□ -1.67
MSH3P25336 VMA10YHR039C-A 345 nt4.63□□□□□ -1.67
MSH3P25336 YKL069WYKL069W 543 nt4.63□□□□□ -1.67
MSH3P25336 BET3YKR068C 582 nt4.63□□□□□ -1.67
MSH3P25336 TIF11YMR260C 462 nt4.63□□□□□ -1.67
MSH3P25336 YPL107WYPL107W 747 nt4.63□□□□□ -1.67
MSH3P25336 YBR062CYBR062C 543 nt4.63□□□□□ -1.67
MSH3P25336 YBR285WYBR285W 435 nt4.63□□□□□ -1.67
MSH3P25336 SAF1YBR280C 1914 nt4.63□□□□□ -1.67
MSH3P25336 PTR3YFR029W 2037 nt4.63□□□□□ -1.67
MSH3P25336 ULS1YOR191W 4860 nt4.62□□□□□ -1.67
MSH3P25336 YGL039WYGL039W 1047 nt4.62□□□□□ -1.67
MSH3P25336 DAD2YKR083C 402 nt4.62□□□□□ -1.67
MSH3P25336 YPL278CYPL278C 303 nt4.62□□□□□ -1.67
MSH3P25336 YPR174CYPR174C 666 nt4.62□□□□□ -1.67
MSH3P25336 AIM4YBR194W 372 nt4.62□□□□□ -1.67
MSH3P25336 SSH4YKL124W 1740 nt4.62□□□□□ -1.67
MSH3P25336 OPT2YPR194C 2634 nt4.62□□□□□ -1.67
MSH3P25336 LYP1YNL268W 1836 nt4.62□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 36.8 ms