Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 MIR4508-201ENST00000584178 70 ntBASIC17.45■□□□□ 0.38
ATF4P18848 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF4P18848 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ATF4P18848 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF4P18848 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATF4P18848 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF4P18848 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.45■□□□□ 0.38
ATF4P18848 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ATF4P18848 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATF4P18848 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATF4P18848 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATF4P18848 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATF4P18848 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ATF4P18848 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
ATF4P18848 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.44■□□□□ 0.38
ATF4P18848 PCDHAC2-203ENST00000615316 3011 ntBASIC17.44■□□□□ 0.38
ATF4P18848 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATF4P18848 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATF4P18848 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.44■□□□□ 0.38
ATF4P18848 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATF4P18848 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATF4P18848 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATF4P18848 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATF4P18848 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ATF4P18848 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.44■□□□□ 0.38
ATF4P18848 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.44■□□□□ 0.38
ATF4P18848 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATF4P18848 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.44■□□□□ 0.38
ATF4P18848 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATF4P18848 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATF4P18848 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATF4P18848 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.43■□□□□ 0.38
ATF4P18848 AC005332.8-201ENST00000622750 2735 ntBASIC17.43■□□□□ 0.38
ATF4P18848 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATF4P18848 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATF4P18848 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.43■□□□□ 0.38
ATF4P18848 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATF4P18848 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATF4P18848 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATF4P18848 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ATF4P18848 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.43■□□□□ 0.38
ATF4P18848 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATF4P18848 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.43■□□□□ 0.38
ATF4P18848 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATF4P18848 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATF4P18848 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATF4P18848 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATF4P18848 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATF4P18848 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
ATF4P18848 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATF4P18848 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATF4P18848 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.42■□□□□ 0.38
ATF4P18848 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.42■□□□□ 0.38
ATF4P18848 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ATF4P18848 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ATF4P18848 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ATF4P18848 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.42■□□□□ 0.38
ATF4P18848 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 AC010980.1-201ENST00000587192 1142 ntBASIC17.42■□□□□ 0.38
ATF4P18848 AL451085.2-201ENST00000605085 799 ntBASIC17.42■□□□□ 0.38
ATF4P18848 AC020763.4-201ENST00000623414 4170 ntBASIC17.42■□□□□ 0.38
ATF4P18848 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.42■□□□□ 0.38
ATF4P18848 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ATF4P18848 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATF4P18848 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATF4P18848 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATF4P18848 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATF4P18848 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.41■□□□□ 0.38
ATF4P18848 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATF4P18848 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATF4P18848 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATF4P18848 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATF4P18848 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ATF4P18848 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATF4P18848 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATF4P18848 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.41■□□□□ 0.38
ATF4P18848 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATF4P18848 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.41■□□□□ 0.38
ATF4P18848 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATF4P18848 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATF4P18848 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATF4P18848 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATF4P18848 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ATF4P18848 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms