Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 KRT18P6-201ENST00000555540 1265 ntBASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB40ALP0C0E4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.83■□□□□ 0.77
RAB40ALP0C0E4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB40ALP0C0E4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB40ALP0C0E4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB40ALP0C0E4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAB40ALP0C0E4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB40ALP0C0E4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB40ALP0C0E4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAB40ALP0C0E4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB40ALP0C0E4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.83■□□□□ 0.77
RAB40ALP0C0E4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB40ALP0C0E4 AC069236.1-201ENST00000604339 616 ntBASIC19.83■□□□□ 0.77
RAB40ALP0C0E4 AC008694.1-202ENST00000636953 945 ntBASIC19.83■□□□□ 0.77
RAB40ALP0C0E4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
RAB40ALP0C0E4 AC127496.7-201ENST00000625110 1798 ntBASIC19.83■□□□□ 0.76
RAB40ALP0C0E4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 AL512625.2-201ENST00000417533 625 ntBASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB40ALP0C0E4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 AL162412.1-201ENST00000567129 965 ntBASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 MIR4758-201ENST00000577688 71 ntBASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 AC243732.1-201ENST00000612648 864 ntBASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.81■□□□□ 0.76
RAB40ALP0C0E4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 AC092053.2-201ENST00000640557 1818 ntBASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40ALP0C0E4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 MKRN4P-201ENST00000444706 1521 ntBASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.79■□□□□ 0.76
RAB40ALP0C0E4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms