Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DQB2P05538 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DQB2P05538 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DQB2P05538 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.37■■□□□ 1.01
HLA-DQB2P05538 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.37■■□□□ 1.01
HLA-DQB2P05538 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.37■■□□□ 1.01
HLA-DQB2P05538 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
HLA-DQB2P05538 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DQB2P05538 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DQB2P05538 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
HLA-DQB2P05538 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DQB2P05538 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
HLA-DQB2P05538 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 AC010141.2-201ENST00000452426 721 ntBASIC21.36■■□□□ 1.01
HLA-DQB2P05538 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQB2P05538 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQB2P05538 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
HLA-DQB2P05538 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQB2P05538 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQB2P05538 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.35■■□□□ 1.01
HLA-DQB2P05538 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQB2P05538 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
HLA-DQB2P05538 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.34■■□□□ 1.01
HLA-DQB2P05538 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
HLA-DQB2P05538 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HLA-DQB2P05538 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
HLA-DQB2P05538 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
HLA-DQB2P05538 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HLA-DQB2P05538 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.33■■□□□ 1.01
HLA-DQB2P05538 NTF6G-201ENST00000591094 616 ntBASIC21.33■■□□□ 1.01
HLA-DQB2P05538 AP001160.3-201ENST00000601484 763 ntBASIC21.33■■□□□ 1.01
HLA-DQB2P05538 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.33■■□□□ 1
HLA-DQB2P05538 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HLA-DQB2P05538 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.33■■□□□ 1
HLA-DQB2P05538 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
HLA-DQB2P05538 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.32■■□□□ 1
HLA-DQB2P05538 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQB2P05538 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.32■■□□□ 1
HLA-DQB2P05538 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQB2P05538 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.32■■□□□ 1
HLA-DQB2P05538 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQB2P05538 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.32■■□□□ 1
HLA-DQB2P05538 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.32■■□□□ 1
HLA-DQB2P05538 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.32■■□□□ 1
HLA-DQB2P05538 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.32■■□□□ 1
HLA-DQB2P05538 AC008175.2-201ENST00000612840 297 ntBASIC21.32■■□□□ 1
HLA-DQB2P05538 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.32■■□□□ 1
HLA-DQB2P05538 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQB2P05538 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQB2P05538 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.32■■□□□ 1
HLA-DQB2P05538 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.32■■□□□ 1
HLA-DQB2P05538 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQB2P05538 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.32■■□□□ 1
HLA-DQB2P05538 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HLA-DQB2P05538 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQB2P05538 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.31■■□□□ 1
HLA-DQB2P05538 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
HLA-DQB2P05538 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQB2P05538 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HLA-DQB2P05538 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
HLA-DQB2P05538 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.31■■□□□ 1
HLA-DQB2P05538 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQB2P05538 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.31■■□□□ 1
HLA-DQB2P05538 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQB2P05538 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms