Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
GAPDHP04406 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GAPDHP04406 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GAPDHP04406 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GAPDHP04406 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GAPDHP04406 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GAPDHP04406 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.53■□□□□ 0.4
GAPDHP04406 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.53■□□□□ 0.4
GAPDHP04406 AC142381.2-201ENST00000566120 298 ntBASIC17.53■□□□□ 0.4
GAPDHP04406 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.53■□□□□ 0.4
GAPDHP04406 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GAPDHP04406 AL136967.2-201ENST00000623968 743 ntBASIC17.53■□□□□ 0.4
GAPDHP04406 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GAPDHP04406 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GAPDHP04406 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GAPDHP04406 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GAPDHP04406 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GAPDHP04406 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.53■□□□□ 0.4
GAPDHP04406 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.52■□□□□ 0.4
GAPDHP04406 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAPDHP04406 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GAPDHP04406 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAPDHP04406 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
GAPDHP04406 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.52■□□□□ 0.4
GAPDHP04406 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.52■□□□□ 0.4
GAPDHP04406 SUDS3P1-201ENST00000505831 966 ntBASIC17.52■□□□□ 0.4
GAPDHP04406 AL031432.3-201ENST00000607698 485 ntBASIC17.52■□□□□ 0.4
GAPDHP04406 AC005837.3-201ENST00000612163 286 ntBASIC17.52■□□□□ 0.4
GAPDHP04406 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GAPDHP04406 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.52■□□□□ 0.39
GAPDHP04406 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GAPDHP04406 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GAPDHP04406 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
GAPDHP04406 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAPDHP04406 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
GAPDHP04406 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAPDHP04406 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAPDHP04406 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
GAPDHP04406 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAPDHP04406 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GAPDHP04406 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAPDHP04406 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.51■□□□□ 0.39
GAPDHP04406 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAPDHP04406 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAPDHP04406 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.51■□□□□ 0.39
GAPDHP04406 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAPDHP04406 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GAPDHP04406 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GAPDHP04406 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GAPDHP04406 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GAPDHP04406 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
GAPDHP04406 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GAPDHP04406 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.5■□□□□ 0.39
GAPDHP04406 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.5■□□□□ 0.39
GAPDHP04406 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 TSPY26P-201ENST00000476365 1326 ntBASIC17.5■□□□□ 0.39
GAPDHP04406 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.5■□□□□ 0.39
GAPDHP04406 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.5■□□□□ 0.39
GAPDHP04406 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.5■□□□□ 0.39
GAPDHP04406 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.5■□□□□ 0.39
GAPDHP04406 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GAPDHP04406 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.49■□□□□ 0.39
GAPDHP04406 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.49■□□□□ 0.39
GAPDHP04406 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAPDHP04406 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GAPDHP04406 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAPDHP04406 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.49■□□□□ 0.39
GAPDHP04406 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAPDHP04406 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GAPDHP04406 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.49■□□□□ 0.39
GAPDHP04406 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAPDHP04406 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.49■□□□□ 0.39
GAPDHP04406 FEM1AP1-201ENST00000431297 1995 ntBASIC17.49■□□□□ 0.39
GAPDHP04406 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GAPDHP04406 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GAPDHP04406 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
GAPDHP04406 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GAPDHP04406 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.49■□□□□ 0.39
GAPDHP04406 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.49■□□□□ 0.39
GAPDHP04406 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GAPDHP04406 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GAPDHP04406 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
GAPDHP04406 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAPDHP04406 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms