Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.54■■□□□ 1.36
PGK1P00558 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.54■■□□□ 1.36
PGK1P00558 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PGK1P00558 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PGK1P00558 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PGK1P00558 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.54■■□□□ 1.36
PGK1P00558 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PGK1P00558 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.54■■□□□ 1.36
PGK1P00558 AC003102.1-202ENST00000563394 1796 ntBASIC23.53■■□□□ 1.36
PGK1P00558 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PGK1P00558 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
PGK1P00558 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.53■■□□□ 1.36
PGK1P00558 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PGK1P00558 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.53■■□□□ 1.36
PGK1P00558 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.53■■□□□ 1.36
PGK1P00558 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PGK1P00558 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
PGK1P00558 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.53■■□□□ 1.36
PGK1P00558 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.53■■□□□ 1.36
PGK1P00558 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.52■■□□□ 1.36
PGK1P00558 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGK1P00558 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGK1P00558 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGK1P00558 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGK1P00558 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGK1P00558 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.52■■□□□ 1.36
PGK1P00558 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGK1P00558 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PGK1P00558 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PGK1P00558 AC008550.1-201ENST00000511500 884 ntBASIC23.52■■□□□ 1.36
PGK1P00558 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.52■■□□□ 1.36
PGK1P00558 AC008403.3-201ENST00000598924 454 ntBASIC23.52■■□□□ 1.36
PGK1P00558 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PGK1P00558 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PGK1P00558 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGK1P00558 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGK1P00558 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PGK1P00558 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.52■■□□□ 1.36
PGK1P00558 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PGK1P00558 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
PGK1P00558 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.51■■□□□ 1.35
PGK1P00558 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PGK1P00558 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.51■■□□□ 1.35
PGK1P00558 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PGK1P00558 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PGK1P00558 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PGK1P00558 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PGK1P00558 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.51■■□□□ 1.35
PGK1P00558 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PGK1P00558 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PGK1P00558 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
PGK1P00558 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PGK1P00558 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.5■■□□□ 1.35
PGK1P00558 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PGK1P00558 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PGK1P00558 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.5■■□□□ 1.35
PGK1P00558 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.5■■□□□ 1.35
PGK1P00558 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PGK1P00558 AL359736.2-201ENST00000621992 437 ntBASIC23.5■■□□□ 1.35
PGK1P00558 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.5■■□□□ 1.35
PGK1P00558 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PGK1P00558 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
PGK1P00558 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.49■■□□□ 1.35
PGK1P00558 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.49■■□□□ 1.35
PGK1P00558 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PGK1P00558 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PGK1P00558 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
PGK1P00558 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PGK1P00558 AC091799.1-201ENST00000422823 811 ntBASIC23.49■■□□□ 1.35
PGK1P00558 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.49■■□□□ 1.35
PGK1P00558 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.49■■□□□ 1.35
PGK1P00558 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.49■■□□□ 1.35
PGK1P00558 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.49■■□□□ 1.35
PGK1P00558 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PGK1P00558 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PGK1P00558 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.49■■□□□ 1.35
PGK1P00558 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PGK1P00558 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
PGK1P00558 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.48■■□□□ 1.35
PGK1P00558 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.48■■□□□ 1.35
PGK1P00558 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.48■■□□□ 1.35
PGK1P00558 CYP2T3P-201ENST00000601990 817 ntBASIC23.48■■□□□ 1.35
PGK1P00558 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.48■■□□□ 1.35
PGK1P00558 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PGK1P00558 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PGK1P00558 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PGK1P00558 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.48■■□□□ 1.35
PGK1P00558 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PGK1P00558 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PGK1P00558 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PGK1P00558 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PGK1P00558 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PGK1P00558 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
PGK1P00558 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PGK1P00558 UBE2SP1-201ENST00000450587 669 ntBASIC23.47■■□□□ 1.35
PGK1P00558 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
PGK1P00558 AC060766.5-201ENST00000590539 871 ntBASIC23.47■■□□□ 1.35
PGK1P00558 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.47■■□□□ 1.35
PGK1P00558 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.47■■□□□ 1.35
PGK1P00558 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms