Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX4O95219 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX4O95219 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX4O95219 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SNX4O95219 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX4O95219 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SNX4O95219 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX4O95219 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX4O95219 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX4O95219 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX4O95219 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.65■□□□□ 0.74
SNX4O95219 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.65■□□□□ 0.74
SNX4O95219 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX4O95219 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX4O95219 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SNX4O95219 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX4O95219 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX4O95219 AC005224.4-201ENST00000583262 1652 ntBASIC19.65■□□□□ 0.74
SNX4O95219 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX4O95219 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNX4O95219 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SNX4O95219 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX4O95219 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.64■□□□□ 0.73
SNX4O95219 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.64■□□□□ 0.73
SNX4O95219 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.64■□□□□ 0.73
SNX4O95219 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.64■□□□□ 0.73
SNX4O95219 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX4O95219 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.64■□□□□ 0.73
SNX4O95219 AC104564.3-201ENST00000582367 638 ntBASIC19.64■□□□□ 0.73
SNX4O95219 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX4O95219 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX4O95219 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX4O95219 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX4O95219 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX4O95219 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX4O95219 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX4O95219 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX4O95219 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX4O95219 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SNX4O95219 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX4O95219 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SNX4O95219 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNX4O95219 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
SNX4O95219 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX4O95219 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.63■□□□□ 0.73
SNX4O95219 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX4O95219 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.63■□□□□ 0.73
SNX4O95219 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX4O95219 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.63■□□□□ 0.73
SNX4O95219 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNX4O95219 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
SNX4O95219 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.63■□□□□ 0.73
SNX4O95219 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SNX4O95219 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX4O95219 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SNX4O95219 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SNX4O95219 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX4O95219 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX4O95219 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX4O95219 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX4O95219 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX4O95219 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX4O95219 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX4O95219 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX4O95219 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX4O95219 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SNX4O95219 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX4O95219 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.62■□□□□ 0.73
SNX4O95219 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
SNX4O95219 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SNX4O95219 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.62■□□□□ 0.73
SNX4O95219 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX4O95219 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX4O95219 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX4O95219 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX4O95219 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX4O95219 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX4O95219 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SNX4O95219 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.61■□□□□ 0.73
SNX4O95219 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.61■□□□□ 0.73
SNX4O95219 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 KRT18P5-201ENST00000436075 1291 ntBASIC19.61■□□□□ 0.73
SNX4O95219 NTF6G-201ENST00000591094 616 ntBASIC19.61■□□□□ 0.73
SNX4O95219 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.61■□□□□ 0.73
SNX4O95219 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms