Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RTN3O95197 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTN3O95197 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
RTN3O95197 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.16■■□□□ 1.14
RTN3O95197 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.16■■□□□ 1.14
RTN3O95197 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RTN3O95197 AC010536.3-201ENST00000620306 533 ntBASIC22.16■■□□□ 1.14
RTN3O95197 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
RTN3O95197 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTN3O95197 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.16■■□□□ 1.14
RTN3O95197 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RTN3O95197 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTN3O95197 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTN3O95197 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.16■■□□□ 1.14
RTN3O95197 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.16■■□□□ 1.14
RTN3O95197 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTN3O95197 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTN3O95197 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTN3O95197 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTN3O95197 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RTN3O95197 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTN3O95197 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.15■■□□□ 1.14
RTN3O95197 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.15■■□□□ 1.14
RTN3O95197 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.15■■□□□ 1.14
RTN3O95197 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.15■■□□□ 1.14
RTN3O95197 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTN3O95197 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.15■■□□□ 1.14
RTN3O95197 KRT16P2-201ENST00000414673 1423 ntBASIC22.14■■□□□ 1.14
RTN3O95197 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RTN3O95197 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTN3O95197 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.14■■□□□ 1.14
RTN3O95197 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTN3O95197 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.14■■□□□ 1.14
RTN3O95197 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTN3O95197 AC010542.4-201ENST00000563151 1910 ntBASIC22.14■■□□□ 1.14
RTN3O95197 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTN3O95197 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTN3O95197 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.14■■□□□ 1.13
RTN3O95197 AC007322.1-201ENST00000426983 750 ntBASIC22.14■■□□□ 1.13
RTN3O95197 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.14■■□□□ 1.13
RTN3O95197 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RTN3O95197 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTN3O95197 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTN3O95197 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTN3O95197 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTN3O95197 ECEL1P1-201ENST00000373592 1742 ntBASIC22.14■■□□□ 1.13
RTN3O95197 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.14■■□□□ 1.13
RTN3O95197 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RTN3O95197 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTN3O95197 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTN3O95197 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RTN3O95197 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.13■■□□□ 1.13
RTN3O95197 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
RTN3O95197 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
RTN3O95197 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.13■■□□□ 1.13
RTN3O95197 AC006970.2-201ENST00000450065 779 ntBASIC22.13■■□□□ 1.13
RTN3O95197 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.13■■□□□ 1.13
RTN3O95197 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RTN3O95197 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.13■■□□□ 1.13
RTN3O95197 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.13■■□□□ 1.13
RTN3O95197 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RTN3O95197 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
RTN3O95197 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.13■■□□□ 1.13
RTN3O95197 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.13■■□□□ 1.13
RTN3O95197 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.13■■□□□ 1.13
RTN3O95197 LINC00565-201ENST00000562710 2331 ntBASIC22.13■■□□□ 1.13
RTN3O95197 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RTN3O95197 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN3O95197 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTN3O95197 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RTN3O95197 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTN3O95197 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.12■■□□□ 1.13
RTN3O95197 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN3O95197 ID1-201ENST00000376105 1233 ntBASIC22.12■■□□□ 1.13
RTN3O95197 CROCCP5-201ENST00000436658 830 ntBASIC22.12■■□□□ 1.13
RTN3O95197 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTN3O95197 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.12■■□□□ 1.13
RTN3O95197 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.12■■□□□ 1.13
RTN3O95197 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RTN3O95197 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.12■■□□□ 1.13
RTN3O95197 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
RTN3O95197 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.12■■□□□ 1.13
RTN3O95197 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN3O95197 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTN3O95197 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.12■■□□□ 1.13
RTN3O95197 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN3O95197 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN3O95197 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTN3O95197 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTN3O95197 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTN3O95197 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.11■■□□□ 1.13
RTN3O95197 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.11■■□□□ 1.13
RTN3O95197 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTN3O95197 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.11■■□□□ 1.13
RTN3O95197 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.11■■□□□ 1.13
RTN3O95197 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.11■■□□□ 1.13
RTN3O95197 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.11■■□□□ 1.13
RTN3O95197 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTN3O95197 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.11■■□□□ 1.13
RTN3O95197 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms