Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CSPG5O95196 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CSPG5O95196 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CSPG5O95196 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CSPG5O95196 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CSPG5O95196 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.57■■□□□ 1.2
CSPG5O95196 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.57■■□□□ 1.2
CSPG5O95196 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CSPG5O95196 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.57■■□□□ 1.2
CSPG5O95196 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CSPG5O95196 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CSPG5O95196 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.57■■□□□ 1.2
CSPG5O95196 AC010980.2-201ENST00000587099 1412 ntBASIC22.57■■□□□ 1.2
CSPG5O95196 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CSPG5O95196 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CSPG5O95196 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CSPG5O95196 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CSPG5O95196 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CSPG5O95196 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.56■■□□□ 1.2
CSPG5O95196 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CSPG5O95196 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CSPG5O95196 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.56■■□□□ 1.2
CSPG5O95196 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CSPG5O95196 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CSPG5O95196 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CSPG5O95196 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.56■■□□□ 1.2
CSPG5O95196 AL512625.2-201ENST00000417533 625 ntBASIC22.56■■□□□ 1.2
CSPG5O95196 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.56■■□□□ 1.2
CSPG5O95196 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.56■■□□□ 1.2
CSPG5O95196 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.56■■□□□ 1.2
CSPG5O95196 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.56■■□□□ 1.2
CSPG5O95196 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.56■■□□□ 1.2
CSPG5O95196 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CSPG5O95196 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CSPG5O95196 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CSPG5O95196 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CSPG5O95196 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CSPG5O95196 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CSPG5O95196 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.56■■□□□ 1.2
CSPG5O95196 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CSPG5O95196 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CSPG5O95196 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CSPG5O95196 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.55■■□□□ 1.2
CSPG5O95196 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.55■■□□□ 1.2
CSPG5O95196 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.55■■□□□ 1.2
CSPG5O95196 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CSPG5O95196 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
CSPG5O95196 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CSPG5O95196 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.55■■□□□ 1.2
CSPG5O95196 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CSPG5O95196 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.54■■□□□ 1.2
CSPG5O95196 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CSPG5O95196 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.54■■□□□ 1.2
CSPG5O95196 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.54■■□□□ 1.2
CSPG5O95196 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.54■■□□□ 1.2
CSPG5O95196 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.54■■□□□ 1.2
CSPG5O95196 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.54■■□□□ 1.2
CSPG5O95196 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CSPG5O95196 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CSPG5O95196 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CSPG5O95196 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CSPG5O95196 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.53■■□□□ 1.2
CSPG5O95196 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CSPG5O95196 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.53■■□□□ 1.2
CSPG5O95196 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.53■■□□□ 1.2
CSPG5O95196 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CSPG5O95196 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CSPG5O95196 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.53■■□□□ 1.2
CSPG5O95196 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CSPG5O95196 AC073648.6-201ENST00000641589 218 ntBASIC22.53■■□□□ 1.2
CSPG5O95196 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CSPG5O95196 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CSPG5O95196 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.53■■□□□ 1.2
CSPG5O95196 AC061975.6-201ENST00000579045 1553 ntBASIC22.52■■□□□ 1.2
CSPG5O95196 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.52■■□□□ 1.2
CSPG5O95196 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.52■■□□□ 1.2
CSPG5O95196 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CSPG5O95196 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CSPG5O95196 AL355472.2-201ENST00000422958 438 ntBASIC22.52■■□□□ 1.2
CSPG5O95196 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.52■■□□□ 1.2
CSPG5O95196 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CSPG5O95196 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CSPG5O95196 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
CSPG5O95196 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms