Protein–RNA interactions for Protein: O75096

LRP4, Low-density lipoprotein receptor-related protein 4, humanhuman

Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4O75096 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.53■□□□□ 0.88
LRP4O75096 BX276092.2-201ENST00000417668 665 ntBASIC20.53■□□□□ 0.88
LRP4O75096 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRP4O75096 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
LRP4O75096 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRP4O75096 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRP4O75096 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.52■□□□□ 0.88
LRP4O75096 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRP4O75096 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRP4O75096 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRP4O75096 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRP4O75096 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.52■□□□□ 0.88
LRP4O75096 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LRP4O75096 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRP4O75096 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRP4O75096 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRP4O75096 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.52■□□□□ 0.87
LRP4O75096 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LRP4O75096 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.51■□□□□ 0.87
LRP4O75096 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRP4O75096 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRP4O75096 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRP4O75096 AC007322.3-201ENST00000426526 701 ntBASIC20.51■□□□□ 0.87
LRP4O75096 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.51■□□□□ 0.87
LRP4O75096 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.51■□□□□ 0.87
LRP4O75096 MYC-209ENST00000641252 345 ntBASIC20.51■□□□□ 0.87
LRP4O75096 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRP4O75096 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRP4O75096 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.51■□□□□ 0.87
LRP4O75096 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.51■□□□□ 0.87
LRP4O75096 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRP4O75096 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LRP4O75096 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LRP4O75096 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.51■□□□□ 0.87
LRP4O75096 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.51■□□□□ 0.87
LRP4O75096 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRP4O75096 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.51■□□□□ 0.87
LRP4O75096 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRP4O75096 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LRP4O75096 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRP4O75096 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRP4O75096 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRP4O75096 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.5■□□□□ 0.87
LRP4O75096 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRP4O75096 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRP4O75096 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
LRP4O75096 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRP4O75096 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRP4O75096 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.49■□□□□ 0.87
LRP4O75096 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.49■□□□□ 0.87
LRP4O75096 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LRP4O75096 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.49■□□□□ 0.87
LRP4O75096 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.49■□□□□ 0.87
LRP4O75096 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.49■□□□□ 0.87
LRP4O75096 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
LRP4O75096 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LRP4O75096 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.49■□□□□ 0.87
LRP4O75096 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.49■□□□□ 0.87
LRP4O75096 ECEL1P1-201ENST00000373592 1742 ntBASIC20.49■□□□□ 0.87
LRP4O75096 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LRP4O75096 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.49■□□□□ 0.87
LRP4O75096 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LRP4O75096 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.49■□□□□ 0.87
LRP4O75096 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRP4O75096 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRP4O75096 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRP4O75096 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
LRP4O75096 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.48■□□□□ 0.87
LRP4O75096 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRP4O75096 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRP4O75096 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.48■□□□□ 0.87
LRP4O75096 AC245052.3-201ENST00000450182 901 ntBASIC20.48■□□□□ 0.87
LRP4O75096 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.48■□□□□ 0.87
LRP4O75096 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.48■□□□□ 0.87
LRP4O75096 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.48■□□□□ 0.87
LRP4O75096 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.48■□□□□ 0.87
LRP4O75096 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRP4O75096 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRP4O75096 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.48■□□□□ 0.87
LRP4O75096 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRP4O75096 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LRP4O75096 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms