Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN1O60925 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN1O60925 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN1O60925 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN1O60925 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PFDN1O60925 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN1O60925 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN1O60925 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PFDN1O60925 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN1O60925 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN1O60925 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
PFDN1O60925 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN1O60925 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.87■□□□□ 0.61
PFDN1O60925 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PFDN1O60925 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.87■□□□□ 0.61
PFDN1O60925 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN1O60925 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN1O60925 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN1O60925 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN1O60925 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN1O60925 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.86■□□□□ 0.61
PFDN1O60925 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN1O60925 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN1O60925 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN1O60925 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
PFDN1O60925 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN1O60925 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PFDN1O60925 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.86■□□□□ 0.61
PFDN1O60925 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.86■□□□□ 0.61
PFDN1O60925 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.86■□□□□ 0.61
PFDN1O60925 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.86■□□□□ 0.61
PFDN1O60925 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN1O60925 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN1O60925 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.85■□□□□ 0.61
PFDN1O60925 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PFDN1O60925 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN1O60925 AL391121.1-201ENST00000607967 1349 ntBASIC18.85■□□□□ 0.61
PFDN1O60925 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN1O60925 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.85■□□□□ 0.61
PFDN1O60925 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN1O60925 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN1O60925 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.85■□□□□ 0.61
PFDN1O60925 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN1O60925 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN1O60925 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN1O60925 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN1O60925 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN1O60925 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN1O60925 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN1O60925 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN1O60925 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PFDN1O60925 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PFDN1O60925 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.84■□□□□ 0.61
PFDN1O60925 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.84■□□□□ 0.61
PFDN1O60925 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.84■□□□□ 0.61
PFDN1O60925 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN1O60925 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.84■□□□□ 0.61
PFDN1O60925 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN1O60925 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN1O60925 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN1O60925 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN1O60925 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN1O60925 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN1O60925 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.83■□□□□ 0.61
PFDN1O60925 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN1O60925 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN1O60925 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN1O60925 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN1O60925 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN1O60925 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN1O60925 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
PFDN1O60925 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN1O60925 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.83■□□□□ 0.6
PFDN1O60925 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.83■□□□□ 0.6
PFDN1O60925 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.83■□□□□ 0.6
PFDN1O60925 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN1O60925 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN1O60925 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN1O60925 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.83■□□□□ 0.6
PFDN1O60925 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
PFDN1O60925 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.83■□□□□ 0.6
PFDN1O60925 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN1O60925 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN1O60925 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.83■□□□□ 0.6
PFDN1O60925 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
PFDN1O60925 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN1O60925 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PFDN1O60925 AL032819.2-201ENST00000624543 2162 ntBASIC18.82■□□□□ 0.6
PFDN1O60925 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PFDN1O60925 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.82■□□□□ 0.6
PFDN1O60925 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN1O60925 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PFDN1O60925 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN1O60925 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN1O60925 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PFDN1O60925 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PFDN1O60925 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN1O60925 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.82■□□□□ 0.6
PFDN1O60925 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN1O60925 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms