Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SSX4O60224 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX4O60224 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.94■□□□□ 0.62
SSX4O60224 AL020996.1-203ENST00000536896 2307 ntBASIC18.94■□□□□ 0.62
SSX4O60224 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SSX4O60224 AC087289.5-201ENST00000586076 3175 ntBASIC18.93■□□□□ 0.62
SSX4O60224 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSX4O60224 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.93■□□□□ 0.62
SSX4O60224 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSX4O60224 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.93■□□□□ 0.62
SSX4O60224 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSX4O60224 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
SSX4O60224 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSX4O60224 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.93■□□□□ 0.62
SSX4O60224 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
SSX4O60224 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.93■□□□□ 0.62
SSX4O60224 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSX4O60224 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.93■□□□□ 0.62
SSX4O60224 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSX4O60224 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.93■□□□□ 0.62
SSX4O60224 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.92■□□□□ 0.62
SSX4O60224 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
SSX4O60224 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.92■□□□□ 0.62
SSX4O60224 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSX4O60224 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.92■□□□□ 0.62
SSX4O60224 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SSX4O60224 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SSX4O60224 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SSX4O60224 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SSX4O60224 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.92■□□□□ 0.62
SSX4O60224 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.92■□□□□ 0.62
SSX4O60224 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSX4O60224 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSX4O60224 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSX4O60224 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SSX4O60224 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSX4O60224 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSX4O60224 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSX4O60224 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.91■□□□□ 0.62
SSX4O60224 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSX4O60224 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.91■□□□□ 0.62
SSX4O60224 AC034268.1-201ENST00000441047 882 ntBASIC18.91■□□□□ 0.62
SSX4O60224 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.91■□□□□ 0.62
SSX4O60224 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSX4O60224 Z98882.1-201ENST00000622160 2253 ntBASIC18.91■□□□□ 0.62
SSX4O60224 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.91■□□□□ 0.62
SSX4O60224 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSX4O60224 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.91■□□□□ 0.62
SSX4O60224 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSX4O60224 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSX4O60224 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SSX4O60224 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
SSX4O60224 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SSX4O60224 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSX4O60224 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SSX4O60224 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
SSX4O60224 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSX4O60224 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.9■□□□□ 0.62
SSX4O60224 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SSX4O60224 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.9■□□□□ 0.62
SSX4O60224 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.9■□□□□ 0.62
SSX4O60224 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.9■□□□□ 0.62
SSX4O60224 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.9■□□□□ 0.62
SSX4O60224 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSX4O60224 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSX4O60224 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
SSX4O60224 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.9■□□□□ 0.62
SSX4O60224 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSX4O60224 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
SSX4O60224 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SSX4O60224 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
SSX4O60224 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSX4O60224 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSX4O60224 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.89■□□□□ 0.61
SSX4O60224 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSX4O60224 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSX4O60224 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSX4O60224 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSX4O60224 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.89■□□□□ 0.61
SSX4O60224 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.89■□□□□ 0.61
SSX4O60224 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.89■□□□□ 0.61
SSX4O60224 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSX4O60224 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSX4O60224 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSX4O60224 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSX4O60224 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSX4O60224 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSX4O60224 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SSX4O60224 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSX4O60224 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSX4O60224 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SSX4O60224 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.88■□□□□ 0.61
SSX4O60224 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.88■□□□□ 0.61
SSX4O60224 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.88■□□□□ 0.61
SSX4O60224 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSX4O60224 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSX4O60224 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSX4O60224 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.88■□□□□ 0.61
SSX4O60224 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.88■□□□□ 0.61
SSX4O60224 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms