Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF13O43567 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF13O43567 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF13O43567 AL157384.1-201ENST00000445995 2473 ntBASIC19.1■□□□□ 0.65
RNF13O43567 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF13O43567 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RNF13O43567 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF13O43567 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF13O43567 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF13O43567 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RNF13O43567 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RNF13O43567 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF13O43567 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF13O43567 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF13O43567 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF13O43567 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF13O43567 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF13O43567 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF13O43567 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RNF13O43567 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF13O43567 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF13O43567 AL031432.3-201ENST00000607698 485 ntBASIC19.09■□□□□ 0.65
RNF13O43567 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF13O43567 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF13O43567 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF13O43567 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF13O43567 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF13O43567 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF13O43567 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF13O43567 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF13O43567 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF13O43567 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF13O43567 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.08■□□□□ 0.65
RNF13O43567 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF13O43567 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
RNF13O43567 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RNF13O43567 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF13O43567 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF13O43567 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF13O43567 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.08■□□□□ 0.64
RNF13O43567 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF13O43567 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF13O43567 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF13O43567 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
RNF13O43567 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF13O43567 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF13O43567 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF13O43567 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF13O43567 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF13O43567 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF13O43567 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RNF13O43567 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF13O43567 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF13O43567 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF13O43567 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF13O43567 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF13O43567 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF13O43567 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF13O43567 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF13O43567 MIR572-201ENST00000384983 95 ntBASIC19.07■□□□□ 0.64
RNF13O43567 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF13O43567 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF13O43567 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF13O43567 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF13O43567 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RNF13O43567 AC142381.2-201ENST00000566120 298 ntBASIC19.07■□□□□ 0.64
RNF13O43567 LINC01521-201ENST00000504184 1943 ntBASIC19.07■□□□□ 0.64
RNF13O43567 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF13O43567 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF13O43567 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF13O43567 AC009237.3-201ENST00000393279 1427 ntBASIC19.07■□□□□ 0.64
RNF13O43567 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF13O43567 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF13O43567 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
RNF13O43567 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF13O43567 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF13O43567 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RNF13O43567 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RNF13O43567 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF13O43567 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF13O43567 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF13O43567 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF13O43567 SUDS3P1-201ENST00000505831 966 ntBASIC19.06■□□□□ 0.64
RNF13O43567 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF13O43567 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF13O43567 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF13O43567 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF13O43567 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RNF13O43567 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF13O43567 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF13O43567 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RNF13O43567 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF13O43567 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNF13O43567 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF13O43567 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF13O43567 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF13O43567 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNF13O43567 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF13O43567 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF13O43567 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms