Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPTLC1O15269 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SPTLC1O15269 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPTLC1O15269 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SPTLC1O15269 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SPTLC1O15269 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SPTLC1O15269 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPTLC1O15269 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPTLC1O15269 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
SPTLC1O15269 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPTLC1O15269 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SPTLC1O15269 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SPTLC1O15269 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SPTLC1O15269 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.55■■□□□ 1.2
SPTLC1O15269 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.55■■□□□ 1.2
SPTLC1O15269 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.55■■□□□ 1.2
SPTLC1O15269 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
SPTLC1O15269 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPTLC1O15269 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPTLC1O15269 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
SPTLC1O15269 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPTLC1O15269 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SPTLC1O15269 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SPTLC1O15269 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SPTLC1O15269 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPTLC1O15269 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SPTLC1O15269 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.54■■□□□ 1.2
SPTLC1O15269 AL355802.2-201ENST00000402069 882 ntBASIC22.54■■□□□ 1.2
SPTLC1O15269 AC007322.1-201ENST00000426983 750 ntBASIC22.54■■□□□ 1.2
SPTLC1O15269 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPTLC1O15269 TERF1P5-201ENST00000477545 1207 ntBASIC22.54■■□□□ 1.2
SPTLC1O15269 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.54■■□□□ 1.2
SPTLC1O15269 AC231657.2-201ENST00000624556 255 ntBASIC22.54■■□□□ 1.2
SPTLC1O15269 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SPTLC1O15269 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.54■■□□□ 1.2
SPTLC1O15269 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPTLC1O15269 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPTLC1O15269 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SPTLC1O15269 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.54■■□□□ 1.2
SPTLC1O15269 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPTLC1O15269 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.53■■□□□ 1.2
SPTLC1O15269 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.53■■□□□ 1.2
SPTLC1O15269 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPTLC1O15269 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.53■■□□□ 1.2
SPTLC1O15269 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPTLC1O15269 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.53■■□□□ 1.2
SPTLC1O15269 KRT16P2-201ENST00000414673 1423 ntBASIC22.53■■□□□ 1.2
SPTLC1O15269 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SPTLC1O15269 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPTLC1O15269 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.53■■□□□ 1.2
SPTLC1O15269 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.53■■□□□ 1.2
SPTLC1O15269 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.53■■□□□ 1.2
SPTLC1O15269 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.53■■□□□ 1.2
SPTLC1O15269 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SPTLC1O15269 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SPTLC1O15269 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPTLC1O15269 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPTLC1O15269 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.52■■□□□ 1.2
SPTLC1O15269 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
SPTLC1O15269 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPTLC1O15269 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPTLC1O15269 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
SPTLC1O15269 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPTLC1O15269 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPTLC1O15269 AC006970.2-201ENST00000450065 779 ntBASIC22.52■■□□□ 1.2
SPTLC1O15269 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.52■■□□□ 1.2
SPTLC1O15269 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPTLC1O15269 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPTLC1O15269 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.52■■□□□ 1.19
SPTLC1O15269 NCF1B-203ENST00000435988 1254 ntBASIC22.51■■□□□ 1.19
SPTLC1O15269 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.51■■□□□ 1.19
SPTLC1O15269 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.51■■□□□ 1.19
SPTLC1O15269 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.51■■□□□ 1.19
SPTLC1O15269 AC005181.1-201ENST00000604782 1256 ntBASIC22.51■■□□□ 1.19
SPTLC1O15269 AL109923.1-201ENST00000618799 583 ntBASIC22.51■■□□□ 1.19
SPTLC1O15269 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.51■■□□□ 1.19
SPTLC1O15269 AC120498.10-201ENST00000621827 505 ntBASIC22.51■■□□□ 1.19
SPTLC1O15269 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPTLC1O15269 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPTLC1O15269 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SPTLC1O15269 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SPTLC1O15269 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPTLC1O15269 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SPTLC1O15269 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.5■■□□□ 1.19
SPTLC1O15269 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.5■■□□□ 1.19
SPTLC1O15269 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SPTLC1O15269 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
SPTLC1O15269 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.5■■□□□ 1.19
SPTLC1O15269 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.5■■□□□ 1.19
SPTLC1O15269 AC066615.1-201ENST00000640911 628 ntBASIC22.5■■□□□ 1.19
SPTLC1O15269 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
SPTLC1O15269 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SPTLC1O15269 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.5■■□□□ 1.19
SPTLC1O15269 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SPTLC1O15269 RBM17P2-201ENST00000616397 1405 ntBASIC22.49■■□□□ 1.19
SPTLC1O15269 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SPTLC1O15269 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SPTLC1O15269 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SPTLC1O15269 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.49■■□□□ 1.19
SPTLC1O15269 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms