Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPC1O15118 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPC1O15118 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.3■■□□□ 1
NPC1O15118 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
NPC1O15118 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPC1O15118 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPC1O15118 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPC1O15118 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NPC1O15118 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
NPC1O15118 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPC1O15118 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPC1O15118 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPC1O15118 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.29■■□□□ 1
NPC1O15118 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.29■■□□□ 1
NPC1O15118 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPC1O15118 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPC1O15118 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.29■■□□□ 1
NPC1O15118 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.29■■□□□ 1
NPC1O15118 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.29■■□□□ 1
NPC1O15118 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.29■■□□□ 1
NPC1O15118 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.29■■□□□ 1
NPC1O15118 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.29■■□□□ 1
NPC1O15118 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPC1O15118 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.29■■□□□ 1
NPC1O15118 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.29■■□□□ 1
NPC1O15118 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPC1O15118 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
NPC1O15118 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.28■■□□□ 1
NPC1O15118 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.28■■□□□ 1
NPC1O15118 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
NPC1O15118 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.28■■□□□ 1
NPC1O15118 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPC1O15118 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPC1O15118 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.28■■□□□ 1
NPC1O15118 RARRES2P4-201ENST00000514074 484 ntBASIC21.28■■□□□ 1
NPC1O15118 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.28■■□□□ 1
NPC1O15118 AC016405.3-201ENST00000607710 860 ntBASIC21.28■■□□□ 1
NPC1O15118 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
NPC1O15118 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.28■■□□□ 1
NPC1O15118 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPC1O15118 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NPC1O15118 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NPC1O15118 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
NPC1O15118 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NPC1O15118 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.27■■□□□ 1
NPC1O15118 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.27■■□□□ 1
NPC1O15118 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.27■■□□□ 1
NPC1O15118 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NPC1O15118 AC093787.1-201ENST00000450396 207 ntBASIC21.27■■□□□ 1
NPC1O15118 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.27■■□□□ 1
NPC1O15118 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.27■■□□□ 1
NPC1O15118 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.27■■□□□ 1
NPC1O15118 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.27■■□□□ 1
NPC1O15118 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.27■■□□□ 1
NPC1O15118 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPC1O15118 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NPC1O15118 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NPC1O15118 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
NPC1O15118 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.26■□□□□ 0.99
NPC1O15118 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
NPC1O15118 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1O15118 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NPC1O15118 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1O15118 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1O15118 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.26■□□□□ 0.99
NPC1O15118 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.26■□□□□ 0.99
NPC1O15118 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NPC1O15118 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.26■□□□□ 0.99
NPC1O15118 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.26■□□□□ 0.99
NPC1O15118 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.26■□□□□ 0.99
NPC1O15118 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.26■□□□□ 0.99
NPC1O15118 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NPC1O15118 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.26■□□□□ 0.99
NPC1O15118 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPC1O15118 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
NPC1O15118 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPC1O15118 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPC1O15118 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.25■□□□□ 0.99
NPC1O15118 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.25■□□□□ 0.99
NPC1O15118 AC245052.3-201ENST00000450182 901 ntBASIC21.25■□□□□ 0.99
NPC1O15118 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPC1O15118 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.25■□□□□ 0.99
NPC1O15118 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPC1O15118 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.25■□□□□ 0.99
NPC1O15118 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.25■□□□□ 0.99
NPC1O15118 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.25■□□□□ 0.99
NPC1O15118 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPC1O15118 AC080038.3-201ENST00000623346 1952 ntBASIC21.25■□□□□ 0.99
NPC1O15118 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPC1O15118 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
NPC1O15118 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPC1O15118 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPC1O15118 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.24■□□□□ 0.99
NPC1O15118 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPC1O15118 AC010980.2-201ENST00000587099 1412 ntBASIC21.24■□□□□ 0.99
NPC1O15118 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.24■□□□□ 0.99
NPC1O15118 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NPC1O15118 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
NPC1O15118 BX276092.2-201ENST00000417668 665 ntBASIC21.24■□□□□ 0.99
NPC1O15118 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms