Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFSF11O14788 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF11O14788 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF11O14788 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF11O14788 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TNFSF11O14788 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF11O14788 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF11O14788 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF11O14788 KRT18P11-201ENST00000435214 1283 ntBASIC18.9■□□□□ 0.62
TNFSF11O14788 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF11O14788 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.9■□□□□ 0.62
TNFSF11O14788 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.9■□□□□ 0.62
TNFSF11O14788 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.9■□□□□ 0.62
TNFSF11O14788 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.9■□□□□ 0.62
TNFSF11O14788 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF11O14788 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
TNFSF11O14788 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF11O14788 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFSF11O14788 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.9■□□□□ 0.62
TNFSF11O14788 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.89■□□□□ 0.62
TNFSF11O14788 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TNFSF11O14788 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
TNFSF11O14788 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF11O14788 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF11O14788 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF11O14788 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF11O14788 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF11O14788 POU5F1P4-201ENST00000413175 1085 ntBASIC18.89■□□□□ 0.61
TNFSF11O14788 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.89■□□□□ 0.61
TNFSF11O14788 KRT18P20-201ENST00000548986 1279 ntBASIC18.89■□□□□ 0.61
TNFSF11O14788 AC120498.10-201ENST00000621827 505 ntBASIC18.89■□□□□ 0.61
TNFSF11O14788 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.89■□□□□ 0.61
TNFSF11O14788 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF11O14788 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TNFSF11O14788 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF11O14788 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TNFSF11O14788 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF11O14788 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF11O14788 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNFSF11O14788 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.89■□□□□ 0.61
TNFSF11O14788 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TNFSF11O14788 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.88■□□□□ 0.61
TNFSF11O14788 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TNFSF11O14788 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF11O14788 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.88■□□□□ 0.61
TNFSF11O14788 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF11O14788 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TNFSF11O14788 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF11O14788 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TNFSF11O14788 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.88■□□□□ 0.61
TNFSF11O14788 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.88■□□□□ 0.61
TNFSF11O14788 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF11O14788 MYCNOS-205ENST00000641950 531 ntBASIC18.88■□□□□ 0.61
TNFSF11O14788 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF11O14788 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF11O14788 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF11O14788 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFSF11O14788 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.88■□□□□ 0.61
TNFSF11O14788 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF11O14788 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF11O14788 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF11O14788 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF11O14788 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF11O14788 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF11O14788 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF11O14788 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.87■□□□□ 0.61
TNFSF11O14788 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.87■□□□□ 0.61
TNFSF11O14788 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.87■□□□□ 0.61
TNFSF11O14788 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TNFSF11O14788 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.87■□□□□ 0.61
TNFSF11O14788 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.87■□□□□ 0.61
TNFSF11O14788 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TNFSF11O14788 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF11O14788 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.87■□□□□ 0.61
TNFSF11O14788 AC244015.2-201ENST00000616358 1861 ntBASIC18.87■□□□□ 0.61
TNFSF11O14788 BID-214ENST00000617586 542 ntTSL 5 BASIC18.87■□□□□ 0.61
TNFSF11O14788 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF11O14788 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF11O14788 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFSF11O14788 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFSF11O14788 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFSF11O14788 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.86■□□□□ 0.61
TNFSF11O14788 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.86■□□□□ 0.61
TNFSF11O14788 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFSF11O14788 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.86■□□□□ 0.61
TNFSF11O14788 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms