Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBFD1O14562 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.42■□□□□ 0.86
UBFD1O14562 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.42■□□□□ 0.86
UBFD1O14562 AC008764.7-201ENST00000593779 1081 ntBASIC20.42■□□□□ 0.86
UBFD1O14562 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
UBFD1O14562 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBFD1O14562 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBFD1O14562 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBFD1O14562 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBFD1O14562 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.42■□□□□ 0.86
UBFD1O14562 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBFD1O14562 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBFD1O14562 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBFD1O14562 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBFD1O14562 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBFD1O14562 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBFD1O14562 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBFD1O14562 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
UBFD1O14562 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBFD1O14562 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.41■□□□□ 0.86
UBFD1O14562 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBFD1O14562 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBFD1O14562 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.41■□□□□ 0.86
UBFD1O14562 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBFD1O14562 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBFD1O14562 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBFD1O14562 AC006128.1-201ENST00000624704 1661 ntBASIC20.41■□□□□ 0.86
UBFD1O14562 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
UBFD1O14562 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBFD1O14562 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBFD1O14562 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBFD1O14562 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBFD1O14562 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
UBFD1O14562 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.4■□□□□ 0.86
UBFD1O14562 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBFD1O14562 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
UBFD1O14562 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBFD1O14562 AC009237.3-201ENST00000393279 1427 ntBASIC20.4■□□□□ 0.86
UBFD1O14562 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.4■□□□□ 0.86
UBFD1O14562 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBFD1O14562 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.4■□□□□ 0.86
UBFD1O14562 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.4■□□□□ 0.86
UBFD1O14562 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
UBFD1O14562 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.4■□□□□ 0.86
UBFD1O14562 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
UBFD1O14562 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.4■□□□□ 0.86
UBFD1O14562 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBFD1O14562 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBFD1O14562 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBFD1O14562 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
UBFD1O14562 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBFD1O14562 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
UBFD1O14562 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.39■□□□□ 0.86
UBFD1O14562 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.39■□□□□ 0.85
UBFD1O14562 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBFD1O14562 AC099791.1-201ENST00000416440 715 ntBASIC20.39■□□□□ 0.85
UBFD1O14562 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.39■□□□□ 0.85
UBFD1O14562 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.39■□□□□ 0.85
UBFD1O14562 AC131212.1-201ENST00000613771 668 ntBASIC20.39■□□□□ 0.85
UBFD1O14562 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.39■□□□□ 0.85
UBFD1O14562 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBFD1O14562 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
UBFD1O14562 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBFD1O14562 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
UBFD1O14562 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.39■□□□□ 0.85
UBFD1O14562 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
UBFD1O14562 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBFD1O14562 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
UBFD1O14562 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
UBFD1O14562 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.38■□□□□ 0.85
UBFD1O14562 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.38■□□□□ 0.85
UBFD1O14562 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBFD1O14562 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.38■□□□□ 0.85
UBFD1O14562 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBFD1O14562 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBFD1O14562 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.38■□□□□ 0.85
UBFD1O14562 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.38■□□□□ 0.85
UBFD1O14562 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.38■□□□□ 0.85
UBFD1O14562 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.38■□□□□ 0.85
UBFD1O14562 AC005224.4-201ENST00000583262 1652 ntBASIC20.38■□□□□ 0.85
UBFD1O14562 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBFD1O14562 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.37■□□□□ 0.85
UBFD1O14562 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
UBFD1O14562 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
UBFD1O14562 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
UBFD1O14562 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
UBFD1O14562 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 TSPY26P-201ENST00000476365 1326 ntBASIC20.37■□□□□ 0.85
UBFD1O14562 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.37■□□□□ 0.85
UBFD1O14562 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms