Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
CHL1O00533 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CHL1O00533 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CHL1O00533 AC007322.4-201ENST00000509611 723 ntBASIC27.22■■□□□ 1.95
CHL1O00533 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC27.22■■□□□ 1.95
CHL1O00533 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CHL1O00533 AC243732.1-201ENST00000612648 864 ntBASIC27.22■■□□□ 1.95
CHL1O00533 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC27.22■■□□□ 1.95
CHL1O00533 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC27.22■■□□□ 1.95
CHL1O00533 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
CHL1O00533 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHL1O00533 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CHL1O00533 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHL1O00533 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CHL1O00533 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHL1O00533 ID1-201ENST00000376105 1233 ntBASIC27.21■■□□□ 1.95
CHL1O00533 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.21■■□□□ 1.95
CHL1O00533 NCF1B-203ENST00000435988 1254 ntBASIC27.21■■□□□ 1.95
CHL1O00533 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHL1O00533 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC27.21■■□□□ 1.95
CHL1O00533 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27.21■■□□□ 1.95
CHL1O00533 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC27.21■■□□□ 1.95
CHL1O00533 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC27.21■■□□□ 1.95
CHL1O00533 AC013268.1-206ENST00000638368 961 ntBASIC27.21■■□□□ 1.95
CHL1O00533 AC112229.1-201ENST00000639295 961 ntBASIC27.21■■□□□ 1.95
CHL1O00533 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC27.21■■□□□ 1.95
CHL1O00533 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHL1O00533 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHL1O00533 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CHL1O00533 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHL1O00533 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHL1O00533 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHL1O00533 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC27.2■■□□□ 1.95
CHL1O00533 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC27.2■■□□□ 1.95
CHL1O00533 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC27.2■■□□□ 1.95
CHL1O00533 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CHL1O00533 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
CHL1O00533 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
CHL1O00533 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CHL1O00533 MIR663A-201ENST00000385250 93 ntBASIC27.2■■□□□ 1.94
CHL1O00533 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC27.2■■□□□ 1.94
CHL1O00533 AC068338.2-201ENST00000563278 1430 ntBASIC27.2■■□□□ 1.94
CHL1O00533 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC27.2■■□□□ 1.94
CHL1O00533 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.2■■□□□ 1.94
CHL1O00533 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC27.2■■□□□ 1.94
CHL1O00533 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CHL1O00533 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CHL1O00533 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CHL1O00533 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC27.19■■□□□ 1.94
CHL1O00533 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC27.19■■□□□ 1.94
CHL1O00533 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.19■■□□□ 1.94
CHL1O00533 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
CHL1O00533 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC27.19■■□□□ 1.94
CHL1O00533 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.19■■□□□ 1.94
CHL1O00533 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CHL1O00533 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
CHL1O00533 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHL1O00533 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC27.18■■□□□ 1.94
CHL1O00533 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC27.18■■□□□ 1.94
CHL1O00533 AC005181.1-201ENST00000604782 1256 ntBASIC27.18■■□□□ 1.94
CHL1O00533 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC27.18■■□□□ 1.94
CHL1O00533 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHL1O00533 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHL1O00533 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHL1O00533 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHL1O00533 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHL1O00533 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHL1O00533 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC27.18■■□□□ 1.94
CHL1O00533 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CHL1O00533 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHL1O00533 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC27.17■■□□□ 1.94
CHL1O00533 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC27.17■■□□□ 1.94
CHL1O00533 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC27.17■■□□□ 1.94
CHL1O00533 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.17■■□□□ 1.94
CHL1O00533 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC27.17■■□□□ 1.94
CHL1O00533 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC27.17■■□□□ 1.94
CHL1O00533 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC27.17■■□□□ 1.94
CHL1O00533 STK25-234ENST00000535007 2459 ntTSL 2 BASIC27.17■■□□□ 1.94
CHL1O00533 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CHL1O00533 TUB-203ENST00000534099 1759 ntTSL 2 BASIC27.17■■□□□ 1.94
CHL1O00533 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHL1O00533 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
CHL1O00533 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHL1O00533 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHL1O00533 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC27.16■■□□□ 1.94
CHL1O00533 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC27.16■■□□□ 1.94
CHL1O00533 AC006970.2-201ENST00000450065 779 ntBASIC27.16■■□□□ 1.94
CHL1O00533 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC27.16■■□□□ 1.94
CHL1O00533 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHL1O00533 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHL1O00533 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHL1O00533 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHL1O00533 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHL1O00533 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
CHL1O00533 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC27.16■■□□□ 1.94
CHL1O00533 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHL1O00533 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHL1O00533 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHL1O00533 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHL1O00533 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms