Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX39AO00148 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
DDX39AO00148 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX39AO00148 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.7■■□□□ 1.39
DDX39AO00148 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.39
DDX39AO00148 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
DDX39AO00148 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
DDX39AO00148 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX39AO00148 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.7■■□□□ 1.38
DDX39AO00148 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
DDX39AO00148 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX39AO00148 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.7■■□□□ 1.38
DDX39AO00148 POU5F1P4-201ENST00000413175 1085 ntBASIC23.7■■□□□ 1.38
DDX39AO00148 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.7■■□□□ 1.38
DDX39AO00148 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.7■■□□□ 1.38
DDX39AO00148 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.7■■□□□ 1.38
DDX39AO00148 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.7■■□□□ 1.38
DDX39AO00148 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.7■■□□□ 1.38
DDX39AO00148 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.7■■□□□ 1.38
DDX39AO00148 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX39AO00148 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX39AO00148 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX39AO00148 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX39AO00148 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX39AO00148 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX39AO00148 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
DDX39AO00148 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX39AO00148 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
DDX39AO00148 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX39AO00148 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX39AO00148 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX39AO00148 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX39AO00148 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX39AO00148 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX39AO00148 ID1-201ENST00000376105 1233 ntBASIC23.69■■□□□ 1.38
DDX39AO00148 HLA-L-209ENST00000420110 1011 ntBASIC23.69■■□□□ 1.38
DDX39AO00148 AC007322.1-201ENST00000426983 750 ntBASIC23.69■■□□□ 1.38
DDX39AO00148 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX39AO00148 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX39AO00148 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.69■■□□□ 1.38
DDX39AO00148 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX39AO00148 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX39AO00148 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
DDX39AO00148 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
DDX39AO00148 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX39AO00148 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX39AO00148 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.68■■□□□ 1.38
DDX39AO00148 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
DDX39AO00148 CNN2P6-201ENST00000439038 900 ntBASIC23.68■■□□□ 1.38
DDX39AO00148 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.68■■□□□ 1.38
DDX39AO00148 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
DDX39AO00148 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.68■■□□□ 1.38
DDX39AO00148 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.68■■□□□ 1.38
DDX39AO00148 AC231657.2-201ENST00000624556 255 ntBASIC23.68■■□□□ 1.38
DDX39AO00148 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX39AO00148 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX39AO00148 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX39AO00148 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX39AO00148 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX39AO00148 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
DDX39AO00148 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
DDX39AO00148 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
DDX39AO00148 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
DDX39AO00148 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
DDX39AO00148 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.67■■□□□ 1.38
DDX39AO00148 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.67■■□□□ 1.38
DDX39AO00148 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX39AO00148 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX39AO00148 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.67■■□□□ 1.38
DDX39AO00148 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.67■■□□□ 1.38
DDX39AO00148 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX39AO00148 AL050303.2-201ENST00000619798 666 ntBASIC23.67■■□□□ 1.38
DDX39AO00148 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
DDX39AO00148 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
DDX39AO00148 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
DDX39AO00148 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.67■■□□□ 1.38
DDX39AO00148 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.67■■□□□ 1.38
DDX39AO00148 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
DDX39AO00148 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX39AO00148 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX39AO00148 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.66■■□□□ 1.38
DDX39AO00148 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
DDX39AO00148 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX39AO00148 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX39AO00148 TERF1P5-201ENST00000477545 1207 ntBASIC23.66■■□□□ 1.38
DDX39AO00148 SLC7A5P1-201ENST00000568957 537 ntBASIC23.66■■□□□ 1.38
DDX39AO00148 AC005181.1-201ENST00000604782 1256 ntBASIC23.66■■□□□ 1.38
DDX39AO00148 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX39AO00148 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
DDX39AO00148 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX39AO00148 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX39AO00148 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX39AO00148 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX39AO00148 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX39AO00148 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX39AO00148 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.65■■□□□ 1.38
DDX39AO00148 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.65■■□□□ 1.38
DDX39AO00148 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.65■■□□□ 1.38
DDX39AO00148 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.65■■□□□ 1.38
DDX39AO00148 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms