Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMX2-CTNND1H3BSU7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TMX2-CTNND1H3BSU7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMX2-CTNND1H3BSU7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.6■□□□□ 0.89
TMX2-CTNND1H3BSU7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMX2-CTNND1H3BSU7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TMX2-CTNND1H3BSU7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 AC055733.4-201ENST00000638462 1354 ntBASIC20.59■□□□□ 0.89
TMX2-CTNND1H3BSU7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 AC138907.5-202ENST00000569484 235 ntBASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMX2-CTNND1H3BSU7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMX2-CTNND1H3BSU7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.58■□□□□ 0.88
TMX2-CTNND1H3BSU7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMX2-CTNND1H3BSU7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMX2-CTNND1H3BSU7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 AC010141.2-201ENST00000452426 721 ntBASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 SLC7A5P2-201ENST00000553010 536 ntBASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.57■□□□□ 0.88
TMX2-CTNND1H3BSU7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 AC092667.1-201ENST00000434301 2586 ntBASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 AL050303.2-201ENST00000619798 666 ntBASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMX2-CTNND1H3BSU7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 SLC7A5P1-201ENST00000568957 537 ntBASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 AC092068.2-201ENST00000590491 1708 ntBASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TMX2-CTNND1H3BSU7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 AP004607.7-201ENST00000527152 1677 ntBASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMX2-CTNND1H3BSU7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms