Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF223E7ERA6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RNF223E7ERA6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
RNF223E7ERA6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF223E7ERA6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF223E7ERA6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF223E7ERA6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF223E7ERA6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
RNF223E7ERA6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF223E7ERA6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF223E7ERA6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.48■□□□□ 0.39
RNF223E7ERA6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF223E7ERA6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF223E7ERA6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF223E7ERA6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF223E7ERA6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF223E7ERA6 AL355472.2-201ENST00000422958 438 ntBASIC17.48■□□□□ 0.39
RNF223E7ERA6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF223E7ERA6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF223E7ERA6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.48■□□□□ 0.39
RNF223E7ERA6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF223E7ERA6 AC137767.1-201ENST00000602918 1920 ntBASIC17.48■□□□□ 0.39
RNF223E7ERA6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RNF223E7ERA6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF223E7ERA6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF223E7ERA6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF223E7ERA6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RNF223E7ERA6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF223E7ERA6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF223E7ERA6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RNF223E7ERA6 Z99916.3-201ENST00000623422 1080 ntBASIC17.47■□□□□ 0.39
RNF223E7ERA6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF223E7ERA6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF223E7ERA6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF223E7ERA6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF223E7ERA6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF223E7ERA6 KRT17P1-201ENST00000399211 1546 ntBASIC17.47■□□□□ 0.39
RNF223E7ERA6 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF223E7ERA6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF223E7ERA6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF223E7ERA6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF223E7ERA6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
RNF223E7ERA6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF223E7ERA6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF223E7ERA6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF223E7ERA6 UBE2SP1-201ENST00000450587 669 ntBASIC17.46■□□□□ 0.39
RNF223E7ERA6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF223E7ERA6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF223E7ERA6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF223E7ERA6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RNF223E7ERA6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF223E7ERA6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF223E7ERA6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF223E7ERA6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RNF223E7ERA6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF223E7ERA6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF223E7ERA6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF223E7ERA6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RNF223E7ERA6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RNF223E7ERA6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF223E7ERA6 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF223E7ERA6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF223E7ERA6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF223E7ERA6 AL359736.2-201ENST00000621992 437 ntBASIC17.45■□□□□ 0.38
RNF223E7ERA6 FAM197Y4-202ENST00000622692 608 ntBASIC17.45■□□□□ 0.38
RNF223E7ERA6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF223E7ERA6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF223E7ERA6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF223E7ERA6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF223E7ERA6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF223E7ERA6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF223E7ERA6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RNF223E7ERA6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF223E7ERA6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF223E7ERA6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF223E7ERA6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF223E7ERA6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF223E7ERA6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF223E7ERA6 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF223E7ERA6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RNF223E7ERA6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF223E7ERA6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF223E7ERA6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF223E7ERA6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.44■□□□□ 0.38
RNF223E7ERA6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.44■□□□□ 0.38
RNF223E7ERA6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF223E7ERA6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF223E7ERA6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
RNF223E7ERA6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF223E7ERA6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF223E7ERA6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF223E7ERA6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF223E7ERA6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF223E7ERA6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF223E7ERA6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF223E7ERA6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF223E7ERA6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF223E7ERA6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RNF223E7ERA6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RNF223E7ERA6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms