Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 AC009102.2-201ENST00000606772 1639 ntBASIC14.91□□□□□ -0.02
LINC01546A6NGU7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01546A6NGU7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01546A6NGU7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01546A6NGU7 TNXA-203ENST00000507684 2038 ntBASIC14.9□□□□□ -0.02
LINC01546A6NGU7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01546A6NGU7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01546A6NGU7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01546A6NGU7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC01546A6NGU7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01546A6NGU7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01546A6NGU7 AL034346.1-201ENST00000568244 1277 ntBASIC14.9□□□□□ -0.02
LINC01546A6NGU7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01546A6NGU7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01546A6NGU7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
LINC01546A6NGU7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 AC139795.1-202ENST00000500444 432 ntBASIC14.89□□□□□ -0.03
LINC01546A6NGU7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 TCF3P1-201ENST00000423021 1937 ntBASIC14.89□□□□□ -0.03
LINC01546A6NGU7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01546A6NGU7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 AC068587.7-201ENST00000641602 218 ntBASIC14.88□□□□□ -0.03
LINC01546A6NGU7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01546A6NGU7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LINC01546A6NGU7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms