Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DUXBA0A1W2PPF3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
DUXBA0A1W2PPF3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
DUXBA0A1W2PPF3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 AL033527.3-201ENST00000566366 1196 ntBASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 MIR4787-201ENST00000607364 84 ntBASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.14■□□□□ 0.33
DUXBA0A1W2PPF3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 PLK5-205ENST00000642079 1969 ntBASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 AC007952.6-201ENST00000573168 2673 ntBASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 AC003957.1-201ENST00000625108 2673 ntBASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 RNF165-205ENST00000588679 2904 ntBASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
DUXBA0A1W2PPF3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 AC006455.2-201ENST00000429931 906 ntBASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DUXBA0A1W2PPF3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 MIR6724-1-201ENST00000616420 92 ntBASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 MIR6724-2-201ENST00000616483 92 ntBASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 MIR6724-4-201ENST00000617390 92 ntBASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 MIR6724-3-201ENST00000622482 92 ntBASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.11■□□□□ 0.33
DUXBA0A1W2PPF3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DUXBA0A1W2PPF3 AP006587.3-201ENST00000525742 1516 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms