Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 AC004854.2-201ENST00000608450 1441 ntBASIC24.5■■□□□ 1.51
CCDC196A0A1B0GTZ2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.49■■□□□ 1.51
CCDC196A0A1B0GTZ2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 KRT19P1-201ENST00000405746 1186 ntBASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 AC010141.2-201ENST00000452426 721 ntBASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.48■■□□□ 1.51
CCDC196A0A1B0GTZ2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.47■■□□□ 1.51
CCDC196A0A1B0GTZ2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 NTF6G-201ENST00000591094 616 ntBASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 AP001160.3-201ENST00000601484 763 ntBASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC196A0A1B0GTZ2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.45■■□□□ 1.51
CCDC196A0A1B0GTZ2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CCDC196A0A1B0GTZ2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC196A0A1B0GTZ2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC196A0A1B0GTZ2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.45■■□□□ 1.5
CCDC196A0A1B0GTZ2 MIR5787-201ENST00000611784 55 ntBASIC24.45■■□□□ 1.5
CCDC196A0A1B0GTZ2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CCDC196A0A1B0GTZ2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC196A0A1B0GTZ2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC196A0A1B0GTZ2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC196A0A1B0GTZ2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CCDC196A0A1B0GTZ2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
CCDC196A0A1B0GTZ2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC196A0A1B0GTZ2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC196A0A1B0GTZ2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.44■■□□□ 1.5
CCDC196A0A1B0GTZ2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC196A0A1B0GTZ2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC196A0A1B0GTZ2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.44■■□□□ 1.5
CCDC196A0A1B0GTZ2 AC120498.10-201ENST00000621827 505 ntBASIC24.44■■□□□ 1.5
CCDC196A0A1B0GTZ2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC196A0A1B0GTZ2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC196A0A1B0GTZ2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC196A0A1B0GTZ2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC196A0A1B0GTZ2 AC061975.6-201ENST00000579045 1553 ntBASIC24.43■■□□□ 1.5
CCDC196A0A1B0GTZ2 AC007375.3-201ENST00000600936 2314 ntBASIC24.43■■□□□ 1.5
CCDC196A0A1B0GTZ2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC196A0A1B0GTZ2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.43■■□□□ 1.5
CCDC196A0A1B0GTZ2 KRT18P20-201ENST00000548986 1279 ntBASIC24.43■■□□□ 1.5
CCDC196A0A1B0GTZ2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC196A0A1B0GTZ2 FEM1AP4-201ENST00000443167 1987 ntBASIC24.43■■□□□ 1.5
CCDC196A0A1B0GTZ2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC196A0A1B0GTZ2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.42■■□□□ 1.5
CCDC196A0A1B0GTZ2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms