Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC120498.10-201ENST00000621827 505 ntBASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV41A0A0B4J266 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 POU5F1P4-201ENST00000413175 1085 ntBASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 AC137761.2-201ENST00000561729 223 ntBASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 AC145350.3-201ENST00000569033 163 ntBASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV41A0A0B4J266 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAV41A0A0B4J266 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV41A0A0B4J266 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV41A0A0B4J266 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAV41A0A0B4J266 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV41A0A0B4J266 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV41A0A0B4J266 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV41A0A0B4J266 AC016769.1-201ENST00000409132 1010 ntBASIC16.54■□□□□ 0.24
TRAV41A0A0B4J266 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAV41A0A0B4J266 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV41A0A0B4J266 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV41A0A0B4J266 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV41A0A0B4J266 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV41A0A0B4J266 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV41A0A0B4J266 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 KRT18P20-201ENST00000548986 1279 ntBASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV41A0A0B4J266 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV41A0A0B4J266 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms