Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 AL034346.1-201ENST00000568244 1277 ntBASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 PCDHAC2-203ENST00000615316 3011 ntBASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TRAV5A0A0B4J249 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 AC073314.1-201ENST00000568729 2216 ntBASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV5A0A0B4J249 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 AC006128.1-201ENST00000624704 1661 ntBASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 PLK5-205ENST00000642079 1969 ntBASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 AL356740.2-201ENST00000601559 647 ntBASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV5A0A0B4J249 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV5A0A0B4J249 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAV5A0A0B4J249 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.27■□□□□ 0.19
TRAV5A0A0B4J249 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV5A0A0B4J249 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
TRAV5A0A0B4J249 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV5A0A0B4J249 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV5A0A0B4J249 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV5A0A0B4J249 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
TRAV5A0A0B4J249 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms