Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRB4X5D2U9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRB4X5D2U9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DRB4X5D2U9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRB4X5D2U9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DRB4X5D2U9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRB4X5D2U9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.81■□□□□ 0.12
HLA-DRB4X5D2U9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DRB4X5D2U9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DRB4X5D2U9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRB4X5D2U9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRB4X5D2U9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DRB4X5D2U9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 AC026471.6-201ENST00000622954 1905 ntBASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DRB4X5D2U9 AC005224.4-201ENST00000583262 1652 ntBASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DRB4X5D2U9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 AC244015.2-201ENST00000616358 1861 ntBASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DRB4X5D2U9 AC003102.1-202ENST00000563394 1796 ntBASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DRB4X5D2U9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms