Protein–RNA interactions for Protein: Q9Y5X3

SNX5, Sorting nexin-5, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5Q9Y5X3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX5Q9Y5X3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX5Q9Y5X3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX5Q9Y5X3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX5Q9Y5X3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX5Q9Y5X3 GABARAPL3-202ENST00000624044 1851 ntBASIC19.43■□□□□ 0.7
SNX5Q9Y5X3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX5Q9Y5X3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX5Q9Y5X3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX5Q9Y5X3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX5Q9Y5X3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX5Q9Y5X3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
SNX5Q9Y5X3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNX5Q9Y5X3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.43■□□□□ 0.7
SNX5Q9Y5X3 MIR6722-201ENST00000617286 78 ntBASIC19.43■□□□□ 0.7
SNX5Q9Y5X3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SNX5Q9Y5X3 AC005703.6-201ENST00000623265 1329 ntBASIC19.43■□□□□ 0.7
SNX5Q9Y5X3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 HCG11-201ENST00000411553 5696 ntBASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SNX5Q9Y5X3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SNX5Q9Y5X3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SNX5Q9Y5X3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX5Q9Y5X3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX5Q9Y5X3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX5Q9Y5X3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX5Q9Y5X3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.41■□□□□ 0.7
SNX5Q9Y5X3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX5Q9Y5X3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX5Q9Y5X3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX5Q9Y5X3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX5Q9Y5X3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SNX5Q9Y5X3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX5Q9Y5X3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms