Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGA3Q9Y5H0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 KRT18P20-201ENST00000548986 1279 ntBASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 SLC7A5P2-201ENST00000553010 536 ntBASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGA3Q9Y5H0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA3Q9Y5H0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCDHGA3Q9Y5H0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGA3Q9Y5H0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA3Q9Y5H0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGA3Q9Y5H0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGA3Q9Y5H0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA3Q9Y5H0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA3Q9Y5H0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGA3Q9Y5H0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHGA3Q9Y5H0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.39■□□□□ 0.86
PCDHGA3Q9Y5H0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
PCDHGA3Q9Y5H0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
PCDHGA3Q9Y5H0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA3Q9Y5H0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.39■□□□□ 0.86
PCDHGA3Q9Y5H0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA3Q9Y5H0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA3Q9Y5H0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA3Q9Y5H0 GUSBP6-202ENST00000438529 1198 ntBASIC20.39■□□□□ 0.85
PCDHGA3Q9Y5H0 AC010141.2-201ENST00000452426 721 ntBASIC20.39■□□□□ 0.85
PCDHGA3Q9Y5H0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHGA3Q9Y5H0 AC138907.5-202ENST00000569484 235 ntBASIC20.39■□□□□ 0.85
PCDHGA3Q9Y5H0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PCDHGA3Q9Y5H0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PCDHGA3Q9Y5H0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PCDHGA3Q9Y5H0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 CD99P1-205ENST00000527459 561 ntBASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 LINC01960-201ENST00000563759 1884 ntBASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA3Q9Y5H0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA3Q9Y5H0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA3Q9Y5H0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHGA3Q9Y5H0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHGA3Q9Y5H0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA3Q9Y5H0 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA3Q9Y5H0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA3Q9Y5H0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA3Q9Y5H0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHGA3Q9Y5H0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PCDHGA3Q9Y5H0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA3Q9Y5H0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA3Q9Y5H0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA3Q9Y5H0 AL137060.1-201ENST00000618151 2648 ntBASIC20.36■□□□□ 0.85
PCDHGA3Q9Y5H0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA3Q9Y5H0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA3Q9Y5H0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA3Q9Y5H0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA3Q9Y5H0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGA3Q9Y5H0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA3Q9Y5H0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHGA3Q9Y5H0 AL034346.1-201ENST00000568244 1277 ntBASIC20.36■□□□□ 0.85
PCDHGA3Q9Y5H0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA3Q9Y5H0 TMEM191A-211ENST00000637163 1067 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms