Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDHGB1Q9Y5G3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGB1Q9Y5G3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGB1Q9Y5G3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGB1Q9Y5G3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
PCDHGB1Q9Y5G3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGB1Q9Y5G3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGB1Q9Y5G3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
PCDHGB1Q9Y5G3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGB1Q9Y5G3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
PCDHGB1Q9Y5G3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 AC073314.1-201ENST00000568729 2216 ntBASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB1Q9Y5G3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB1Q9Y5G3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 AFG3L1P-217ENST00000557444 2447 ntBASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 Z92544.1-202ENST00000571933 1220 ntBASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 AL499627.2-201ENST00000606283 725 ntBASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB1Q9Y5G3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB1Q9Y5G3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB1Q9Y5G3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB1Q9Y5G3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms