Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PCDHGB3Q9Y5G1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB3Q9Y5G1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHGB3Q9Y5G1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB3Q9Y5G1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHGB3Q9Y5G1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB3Q9Y5G1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
PCDHGB3Q9Y5G1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGB3Q9Y5G1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGB3Q9Y5G1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGB3Q9Y5G1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGB3Q9Y5G1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB3Q9Y5G1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGB3Q9Y5G1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 TSPY26P-201ENST00000476365 1326 ntBASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHGB3Q9Y5G1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 MIR572-201ENST00000384983 95 ntBASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGB3Q9Y5G1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGB3Q9Y5G1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
PCDHGB3Q9Y5G1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.89■□□□□ 0.78
PCDHGB3Q9Y5G1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
PCDHGB3Q9Y5G1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 AF106564.1-201ENST00000607058 2553 ntBASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 AC073130.3-201ENST00000624389 2278 ntBASIC19.89■□□□□ 0.77
PCDHGB3Q9Y5G1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 SMUG1P1-201ENST00000590640 811 ntBASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 AL354811.1-201ENST00000610286 706 ntBASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms